Parental gene: | SUPV3L1, ENSCJAG00000012937 |
| Aliases: | None |
| Description: | None |
| Organism: | Marmoset (Callithrix jacchus) |
| Coordinates: | 12:54962558..54988949(-) |
>ENSCJAG00000012937
ATGTCCTTCCCCCGGTGTGCCCTACTGTGGGCTCGGCTCTCCGCGGGGCGCCAGGCTGGCCACCGGGCAGCCATCTGCTC
TGCTCTTCGCCCCCACTTTGGGCCCTTTCCCGGGTTTCTGGGGCAAGTTTCTGTCCTTGCCACAACCTCCTCCTCTGCCT
CTGGTGGCTCCAAAACCCCGAACACGGCCTTGTTCGTGCCCCTGAGTGTGAAACCTCAGGGCCCCAACGCCGATGGCGAC
GTTGGGGCCGAGCTAACCCAACCTCTTGACAAGAATAAAGTAAAGGAGATCTTAGACAAATTTTACAAGAGGAAAGAAGT
TCAGAAACTGGGTGCTGATTATGGACTGGATGCTCGTCTCTTCCACCAAGCTTTCATAAGCTTTAGAAATTATATTATGC
AGTCTCATTCCCTGGATGTGGACATTCACATTGTTTTGAATGATATTTGCTTCGGTGCAGCTCATGTGGATGACTTATTT
CCATTTTTCTTGAGACATGCCAAACAAATATTTCCTGTGTTGGAATGTAAGGATGATCTACGTAAAATCAGCGACTTAAG
AATACCACCTAACTGGTACCCAGATGCTAGAGCCATGCAGCGGAAGATAATATTCCATTCAGGCCCCACAAACAGTGGAA
AGACTTATCATGCAATCCAGAAATACTTCTCAGCAAAGTCCGGAGTGTACTGTGGCCCTTTAAAATTACTGGCACATGAG
ATCTTCGAAAAGAGTAATGCTGCTGGTGTGCCATGTGACTTGGTGACAGGTGAGGAGCGTGTGACAGTTCAGCCGGATGG
GAAACAGGCTTCACATGTTGCTTGTACAGTTGAGATGTGCAGTGTTACAACTCCTTATGAAGTGGCTGTAATTGATGAAA
TTCAAATGATTAGAGATCCAGCTAGAGGATGGGCCTGGACCAGAGCACTTCTAGGACTCTGTGCTGAAGAAATTCATTTG
TGTGGAGAACCTGCTGCTATTGACCTGGTGACAGAGCTTATGTTCACAACGGGAGAAGAAGTGGAGGTTCAAGACTACAA
GAGGCTTACCCCCATCTCTGTGCTGGACCGTGCGCTAGAATCTTTAGATAACCTTCGGCCTGGGGACTGCATCGTCTGTT
TTAGCAAGAATGATATTTATTCTGTGAGTCGGCAGATCGAAATTCGGGGATTAGAATCAGCTGTTATATATGGCAGTCTC
CCACCTGGGACCAAACTTGCTCAAGCAAAAAAGTTTAATGATCCCGATGACCCATGCAAAATCTTGGTTGCTACAGATGC
AATTGGCATGGGTCTTAATTTGAGCATAAGGAGAATTATTTTTTACTCCCTTATAAAGCCCAGTATCAATGAAAAGGGAG
AGAAAGAAATAGAACCAATCACAACCTCTCAGGCCCTGCAGATTGCTGGCAGAGCTGGCAGATTCAGCTCACAGTTTAAA
GAAGGAGAGGTTACAACAATGAACCGTGAAGATCTCAGTTTATTAAAGGAAATTTTGAATAGGCCTGTGGATCCCATAAG
GGCAGCTGGTCTTCATCCAACTGCTGAGCAGATTGAAATGTTTGCCTACCATCTCCCTGATACAACGCTTTCCAATCTCA
TTGATATTTTTGTAGACTTTTCACAAGTTGACGGGCAGTATTTTGTCTGCAATATGGATGATTTTAAATTTTCCGCAGAG
TTGATCCAGCATATTCCATTAAGTCTGCGAGTAAGGTATGTTTTCTGCACGGCCCCTATCAACAAGAAGCAGCCTTTTGT
GTGCTCTTCCCTGTTACAGTTTGCCAGGCAGTATAGCAGGAATGAGCCTCTGACCTTTGCATGGTTACGCCGACACATCA
AATGGCCTTTACTTCCGCCTAAGAATATTAAAGACCTCGTGGATCTTGAAGCTATCCACGATGTCTTGGATCTTTACCTG
TGGCTAAGCTACCGATTTATGGATATGTTTCCAGATGCCAGCATTATTCGAGATCTCCAGAAAGAGCTAGATGCTATTAT
CCAGGATGGTGTGCACAATATCACTAAATTGATTAAAATTTCTGAGACACGTAAGCTGTTGAATTTGGAGAGCTTTCCAT
CAGAGAGGCAGTCACGATTATCAGGAGTCTTAAGGAGCCAAGCTAGAAGGGCACGCGGCACCAAAGCTCTAGGAAGTAAA
GCTGCTGAGCCACCCAGCCCTGATGCCAGAGAGCTGTCCCTTGCTTCCAGATTGGTGCAGCAAGGACTCCTCACCCCAGA
TATGCTGAAACAGCTAGAAAAAGAGTGGATGACACAACAAATTGAACGCAACAGAGAAAGAACAGAGTCTGAGACTCATT
CAAAAGGAACGAGAAGAAAGAAGGAACCTGATTCAGATTAG
ATGTCCTTCCCCCGGTGTGCCCTACTGTGGGCTCGGCTCTCCGCGGGGCGCCAGGCTGGCCACCGGGCAGCCATCTGCTC
TGCTCTTCGCCCCCACTTTGGGCCCTTTCCCGGGTTTCTGGGGCAAGTTTCTGTCCTTGCCACAACCTCCTCCTCTGCCT
CTGGTGGCTCCAAAACCCCGAACACGGCCTTGTTCGTGCCCCTGAGTGTGAAACCTCAGGGCCCCAACGCCGATGGCGAC
GTTGGGGCCGAGCTAACCCAACCTCTTGACAAGAATAAAGTAAAGGAGATCTTAGACAAATTTTACAAGAGGAAAGAAGT
TCAGAAACTGGGTGCTGATTATGGACTGGATGCTCGTCTCTTCCACCAAGCTTTCATAAGCTTTAGAAATTATATTATGC
AGTCTCATTCCCTGGATGTGGACATTCACATTGTTTTGAATGATATTTGCTTCGGTGCAGCTCATGTGGATGACTTATTT
CCATTTTTCTTGAGACATGCCAAACAAATATTTCCTGTGTTGGAATGTAAGGATGATCTACGTAAAATCAGCGACTTAAG
AATACCACCTAACTGGTACCCAGATGCTAGAGCCATGCAGCGGAAGATAATATTCCATTCAGGCCCCACAAACAGTGGAA
AGACTTATCATGCAATCCAGAAATACTTCTCAGCAAAGTCCGGAGTGTACTGTGGCCCTTTAAAATTACTGGCACATGAG
ATCTTCGAAAAGAGTAATGCTGCTGGTGTGCCATGTGACTTGGTGACAGGTGAGGAGCGTGTGACAGTTCAGCCGGATGG
GAAACAGGCTTCACATGTTGCTTGTACAGTTGAGATGTGCAGTGTTACAACTCCTTATGAAGTGGCTGTAATTGATGAAA
TTCAAATGATTAGAGATCCAGCTAGAGGATGGGCCTGGACCAGAGCACTTCTAGGACTCTGTGCTGAAGAAATTCATTTG
TGTGGAGAACCTGCTGCTATTGACCTGGTGACAGAGCTTATGTTCACAACGGGAGAAGAAGTGGAGGTTCAAGACTACAA
GAGGCTTACCCCCATCTCTGTGCTGGACCGTGCGCTAGAATCTTTAGATAACCTTCGGCCTGGGGACTGCATCGTCTGTT
TTAGCAAGAATGATATTTATTCTGTGAGTCGGCAGATCGAAATTCGGGGATTAGAATCAGCTGTTATATATGGCAGTCTC
CCACCTGGGACCAAACTTGCTCAAGCAAAAAAGTTTAATGATCCCGATGACCCATGCAAAATCTTGGTTGCTACAGATGC
AATTGGCATGGGTCTTAATTTGAGCATAAGGAGAATTATTTTTTACTCCCTTATAAAGCCCAGTATCAATGAAAAGGGAG
AGAAAGAAATAGAACCAATCACAACCTCTCAGGCCCTGCAGATTGCTGGCAGAGCTGGCAGATTCAGCTCACAGTTTAAA
GAAGGAGAGGTTACAACAATGAACCGTGAAGATCTCAGTTTATTAAAGGAAATTTTGAATAGGCCTGTGGATCCCATAAG
GGCAGCTGGTCTTCATCCAACTGCTGAGCAGATTGAAATGTTTGCCTACCATCTCCCTGATACAACGCTTTCCAATCTCA
TTGATATTTTTGTAGACTTTTCACAAGTTGACGGGCAGTATTTTGTCTGCAATATGGATGATTTTAAATTTTCCGCAGAG
TTGATCCAGCATATTCCATTAAGTCTGCGAGTAAGGTATGTTTTCTGCACGGCCCCTATCAACAAGAAGCAGCCTTTTGT
GTGCTCTTCCCTGTTACAGTTTGCCAGGCAGTATAGCAGGAATGAGCCTCTGACCTTTGCATGGTTACGCCGACACATCA
AATGGCCTTTACTTCCGCCTAAGAATATTAAAGACCTCGTGGATCTTGAAGCTATCCACGATGTCTTGGATCTTTACCTG
TGGCTAAGCTACCGATTTATGGATATGTTTCCAGATGCCAGCATTATTCGAGATCTCCAGAAAGAGCTAGATGCTATTAT
CCAGGATGGTGTGCACAATATCACTAAATTGATTAAAATTTCTGAGACACGTAAGCTGTTGAATTTGGAGAGCTTTCCAT
CAGAGAGGCAGTCACGATTATCAGGAGTCTTAAGGAGCCAAGCTAGAAGGGCACGCGGCACCAAAGCTCTAGGAAGTAAA
GCTGCTGAGCCACCCAGCCCTGATGCCAGAGAGCTGTCCCTTGCTTCCAGATTGGTGCAGCAAGGACTCCTCACCCCAGA
TATGCTGAAACAGCTAGAAAAAGAGTGGATGACACAACAAATTGAACGCAACAGAGAAAGAACAGAGTCTGAGACTCATT
CAAAAGGAACGAGAAGAAAGAAGGAACCTGATTCAGATTAG
| Library | Parental gene expression (RPM) |
|---|---|
| SRP051959_spleen | 13 .74 RPM |
| SRP051959_skeletal_muscle | 26 .14 RPM |
| SRP051959_lymph_node | 13 .65 RPM |
| SRP051959_lung | 13 .97 RPM |
| SRP051959_liver | 21 .42 RPM |
| SRP051959_kidney | 20 .34 RPM |
| SRP051959_heart | 18 .52 RPM |
| SRP051959_colon | 9 .98 RPM |
No homologs available
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_cjac_3878 | 92.28 | 62.60 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSCJAG00000012937 retrocopies