Parental gene: | MRPL46, ENSCJAG00000013019 |
| Aliases: | None |
| Description: | mitochondrial ribosomal protein L46 [Source:HGNC Symbol;Acc:1192] |
| Organism: | Marmoset (Callithrix jacchus) |
| Coordinates: | 6:18910822..18918777(+) |
>ENSCJAG00000013019
ATGGCGGCGCCCGTACGGCGGACTCTGTTAGGAGTGGCGGGGAGCTGGCGGCGGTTCGAGAAGCTCTGGGCCGGTAGCCT
AGGCTCTCGCAGCCTGGCCCTTGCTGCGCCTTCAAGCAGCGGATCCCCATGGCGCCTGTTGGGCGCGTTGTGCCTGCAGC
GGCCGCCTCTAGTCTCCAAGCCGTTTACCCCATTGCAGGAAGAGATGGCGTCTCTACTACAGCAGATCGAGATAGAGAGA
AGCCTGTATTCAGACCATGAGCTTCGTGCTCTGGAGGAAAGCAAGCGACTGGAAAAGAAAAAAGCTGACCTCTATGATGA
AGAAGATGAACAGGATATATTACTGGTGCAAGATCTGGAAGATATGTGGGAACAGAGATTCGTACAGTTCAAACTTGGAG
CTCGTGTAACAGAAGCTGACGAAAAGAATGACCGAACATCCCTGAACCGGAAGCTAGACAGGAACCTTGTTCTGTTAGTC
AGAGAGAAGCTTGGAGATGAGGATGTTTGGATGCTGCCCCAGGCGGAATGGCAGCCTGGGGAGACCCTTCGAGGAACTGC
TGAACGAACCCTAGTGACACTCTCAGAAAACAATATGGAAGCCAAGTTCCTGGGAAATGCACCCTGTGGGCACTACAAAT
TCAAGTTCCCCCAGGCAATGCGGACAGAGAGTAACCTCGGGGCCAAGGTGTTCTTCTTCAAAGCACTGCTGTTAACTGGA
GACTTTTCCCAGGCCGGGAAGAAGGGCCAGCATGTGTGGGTCACTAAGGATGAGCTGAGTGATTATTTGAAACCAAAATA
CCTGGCCCAAGTTAGGAGGTTTCTTTTGGACCTCTGA
ATGGCGGCGCCCGTACGGCGGACTCTGTTAGGAGTGGCGGGGAGCTGGCGGCGGTTCGAGAAGCTCTGGGCCGGTAGCCT
AGGCTCTCGCAGCCTGGCCCTTGCTGCGCCTTCAAGCAGCGGATCCCCATGGCGCCTGTTGGGCGCGTTGTGCCTGCAGC
GGCCGCCTCTAGTCTCCAAGCCGTTTACCCCATTGCAGGAAGAGATGGCGTCTCTACTACAGCAGATCGAGATAGAGAGA
AGCCTGTATTCAGACCATGAGCTTCGTGCTCTGGAGGAAAGCAAGCGACTGGAAAAGAAAAAAGCTGACCTCTATGATGA
AGAAGATGAACAGGATATATTACTGGTGCAAGATCTGGAAGATATGTGGGAACAGAGATTCGTACAGTTCAAACTTGGAG
CTCGTGTAACAGAAGCTGACGAAAAGAATGACCGAACATCCCTGAACCGGAAGCTAGACAGGAACCTTGTTCTGTTAGTC
AGAGAGAAGCTTGGAGATGAGGATGTTTGGATGCTGCCCCAGGCGGAATGGCAGCCTGGGGAGACCCTTCGAGGAACTGC
TGAACGAACCCTAGTGACACTCTCAGAAAACAATATGGAAGCCAAGTTCCTGGGAAATGCACCCTGTGGGCACTACAAAT
TCAAGTTCCCCCAGGCAATGCGGACAGAGAGTAACCTCGGGGCCAAGGTGTTCTTCTTCAAAGCACTGCTGTTAACTGGA
GACTTTTCCCAGGCCGGGAAGAAGGGCCAGCATGTGTGGGTCACTAAGGATGAGCTGAGTGATTATTTGAAACCAAAATA
CCTGGCCCAAGTTAGGAGGTTTCTTTTGGACCTCTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP051959_spleen | 3 .78 RPM |
| SRP051959_skeletal_muscle | 6 .79 RPM |
| SRP051959_lymph_node | 4 .54 RPM |
| SRP051959_lung | 3 .61 RPM |
| SRP051959_liver | 5 .72 RPM |
| SRP051959_kidney | 6 .01 RPM |
| SRP051959_heart | 5 .12 RPM |
| SRP051959_colon | 3 .90 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Felis catus | ENSFCAG00000014966 | ortholog_one2one | 1 retrogene | |
| Microcebus murinus | ENSMICG00000015826 | ortholog_one2one | 1 retrogene | |
| Otolemur garnettii | ENSOGAG00000004736 | ortholog_one2one | 1 retrogene | |
| Rattus norvegicus | ENSRNOG00000018547 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_cjac_3018 | 96.72 | 65.11 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSCJAG00000013019 retrocopies