Parental gene: | BECN1, ENSCJAG00000013144 |
| Aliases: | BECN1, beclin-1 |
| Description: | beclin 1, autophagy related [Source:HGNC Symbol;Acc:1034] |
| Organism: | Marmoset (Callithrix jacchus) |
| Coordinates: | 5:75271373..75283675(-) |
>ENSCJAG00000013144
ATGATGTCCACAGAAAGCGCCAACAGCTTCACTCTGATTGGGGAGGCATCTGATGGCGGCACCATGGAGAACCTCAGCCG
AAGACTGAAGGTCACTGGGGACCTTTTTGACATCATGTCGGGCCAGACAGATGTGGATCACCCACTCTGTGAGGAATGCA
CAGATACTCTTTTAGACCAGCTGGACACTCAGCTCAACGTCACTGAAAATGAATGTCAGAACTACAAACGCTGTTTGGAG
ATCTTAGAGCAAATGAATGAAGATGACAGTGAACAGCTTCAGATGGAGCTAAAAGAGCTGGCACTAGAGGAGGAGAGGCT
GATCCAGGAGCTGGAAGATGTGGAAAAGAACCGCCAGATGGTGGCAGAAAATCTTGAGAAGGTCCAGGCTGAGGCTGAGA
GACTGGATCAGGAGGAAGCTCAGTATCAGAGAGAATACAGTGAATTTAAACGACAACAGCTGGAGCTGGATGATGAGCTG
AAGAGTGTTGAAAACCAGATGCGTTATGCCCAGTTGCAGCTGGACAAGCTGAAGAAAACCAACGTTTTTAATGCAACTTT
CCACATCTGGCACAGTGGACAGTTTGGCACAATCAATAACTTCAGGCTGGGTCGCCTGCCCAGTGTTCCAGTGGAATGGA
ATGAGATTAATGCTGCTTGGGGCCAAACTGTGTTGCTGCTCCATGCTCTGGCCAATAAGATGGGTCTGAAATTTCAGAGG
TATCGACTTGTTCCTTATGGAAACCATTCATATCTGGAGTCTCTGACAGACAAATCTAAGGAGCTGCCGTTATACTGTTC
TGGGGGGTTGCGGTTTTTCTGGGACAACAAGTTTGACCATGCAATGGTGGCTTTCCTGGACTGTGTGCAACAGTTCAAAG
AAGAGGTTGAGAAAGGCGAGACACGTTTTTGTCTTCCCTACAGGATGGATGTGGAGAAAGGCAAGATTGAAGACACAGGA
GGCAGCGGCGGCTCCTATTCCATCAAAACCCAGTTTAACTCTGAGGAGCAGTGGACAAAAGCTCTCAAGTTCATGCTGAC
GAATCTTAAGTGGGGTCTTGCTTGGGTATCCTCACAATTTTATAACAAATGA
ATGATGTCCACAGAAAGCGCCAACAGCTTCACTCTGATTGGGGAGGCATCTGATGGCGGCACCATGGAGAACCTCAGCCG
AAGACTGAAGGTCACTGGGGACCTTTTTGACATCATGTCGGGCCAGACAGATGTGGATCACCCACTCTGTGAGGAATGCA
CAGATACTCTTTTAGACCAGCTGGACACTCAGCTCAACGTCACTGAAAATGAATGTCAGAACTACAAACGCTGTTTGGAG
ATCTTAGAGCAAATGAATGAAGATGACAGTGAACAGCTTCAGATGGAGCTAAAAGAGCTGGCACTAGAGGAGGAGAGGCT
GATCCAGGAGCTGGAAGATGTGGAAAAGAACCGCCAGATGGTGGCAGAAAATCTTGAGAAGGTCCAGGCTGAGGCTGAGA
GACTGGATCAGGAGGAAGCTCAGTATCAGAGAGAATACAGTGAATTTAAACGACAACAGCTGGAGCTGGATGATGAGCTG
AAGAGTGTTGAAAACCAGATGCGTTATGCCCAGTTGCAGCTGGACAAGCTGAAGAAAACCAACGTTTTTAATGCAACTTT
CCACATCTGGCACAGTGGACAGTTTGGCACAATCAATAACTTCAGGCTGGGTCGCCTGCCCAGTGTTCCAGTGGAATGGA
ATGAGATTAATGCTGCTTGGGGCCAAACTGTGTTGCTGCTCCATGCTCTGGCCAATAAGATGGGTCTGAAATTTCAGAGG
TATCGACTTGTTCCTTATGGAAACCATTCATATCTGGAGTCTCTGACAGACAAATCTAAGGAGCTGCCGTTATACTGTTC
TGGGGGGTTGCGGTTTTTCTGGGACAACAAGTTTGACCATGCAATGGTGGCTTTCCTGGACTGTGTGCAACAGTTCAAAG
AAGAGGTTGAGAAAGGCGAGACACGTTTTTGTCTTCCCTACAGGATGGATGTGGAGAAAGGCAAGATTGAAGACACAGGA
GGCAGCGGCGGCTCCTATTCCATCAAAACCCAGTTTAACTCTGAGGAGCAGTGGACAAAAGCTCTCAAGTTCATGCTGAC
GAATCTTAAGTGGGGTCTTGCTTGGGTATCCTCACAATTTTATAACAAATGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP051959_spleen | 22 .88 RPM |
| SRP051959_skeletal_muscle | 29 .74 RPM |
| SRP051959_lymph_node | 23 .24 RPM |
| SRP051959_lung | 22 .66 RPM |
| SRP051959_liver | 17 .59 RPM |
| SRP051959_kidney | 25 .45 RPM |
| SRP051959_heart | 19 .59 RPM |
| SRP051959_colon | 18 .46 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Felis catus | ENSFCAG00000013136 | possible_ortholog | 1 retrogene | |
| Macropus eugenii | ENSMEUG00000011700 | ortholog_one2many | 1 retrogene | |
| Monodelphis domestica | ENSMODG00000015064 | ortholog_one2many | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_cjac_330 | 59.78 | 99.72 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSCJAG00000013144 retrocopies