Parental gene: | WDR77, ENSCJAG00000013344 |
| Aliases: | None |
| Description: | None |
| Organism: | Marmoset (Callithrix jacchus) |
| Coordinates: | 7:147398125..147407430(-) |
>ENSCJAG00000013344
ATGCGAAAGGAAACCCCGCCTCCCCTTGTGCCCCCGGCGGCCCGGGAGTGGAACCTTCCCCCTAATGCTCCCGCCTGCAT
GGAACGGCAGTTGGAGGCTGCGCGGTACCGGTCCGATGGGGCGCTTCTCCTTGGGGCCTCCAGCCTGAGTGGCCGCTGCT
GGGCCGGCTCACTCTGGCTTTTTAAGGACCCTTGTGCTGCCCCCAACGAAGGCTTCTGCTCCGCCGGAGTCCAAACGGAG
GCTGGAGTGGCTGACCTCACTTGGGTTGGGGAGAGAGGTATTCTAGTGGCGTCCGATTCAGGTGCTGTTGAATTGTGGGA
GCTAGATGAGAATGAGACACTTATTGTCAGCAAGTTCTGCAAGTATGAGCATGATGACATTGTGTCTACGGTCAGTGTCC
TGAGCTCTGGCACACAAGCTGTCAGTGGTAGCAAAGACTTCTGCATCAAGGTTTGGGACCTTGCTCAGCAGGTGGTACTG
AATTCATACCGAGCTCATGCTGCGCAGGTCACCTGTGTCGCTGCTTCTCCCCACAAGGATTCTGTGTTTCTTTCATGCAG
TGAGGACAATAGAATTTTACTTTGGGATACCCGCTGTCCCAAGCCAGCATCACACATTGGTTGCAGTGCCTCTGGCTCCC
TTCCTACCTCACTGGCTTGGCATCCTCAGCAAAGTGAAGTCTTTGTCTTTGGGGACGAAAATGGGATGGTCTCCCTTGTT
GACACCAAGAGTACAAGCTGTGTCCTCAGCTCAGCTGTACATTCCCAGTGTGTCACTGGGCTGGTGTTCTCACCACACAG
TGTTCCTTTCCTGGCCTCTCTCAGTGAAGACTGCTCACTTGCTGTGCTGGACTCAAGCCTTTCTGAGGTGTTTAGAAGCC
GAGCCCACAGAGACTTTGTGAGAGATGCTACTTGGTCCCCGCTCAATCACTCGCTGCTTACCACAGTGGGCTGGGACCAC
CAGGTCGTCCACCACATTGTGCCCACAGAACCTCTCCCAGCCCCTGGACCTGCGAGTGTTGCTGAGTAG
ATGCGAAAGGAAACCCCGCCTCCCCTTGTGCCCCCGGCGGCCCGGGAGTGGAACCTTCCCCCTAATGCTCCCGCCTGCAT
GGAACGGCAGTTGGAGGCTGCGCGGTACCGGTCCGATGGGGCGCTTCTCCTTGGGGCCTCCAGCCTGAGTGGCCGCTGCT
GGGCCGGCTCACTCTGGCTTTTTAAGGACCCTTGTGCTGCCCCCAACGAAGGCTTCTGCTCCGCCGGAGTCCAAACGGAG
GCTGGAGTGGCTGACCTCACTTGGGTTGGGGAGAGAGGTATTCTAGTGGCGTCCGATTCAGGTGCTGTTGAATTGTGGGA
GCTAGATGAGAATGAGACACTTATTGTCAGCAAGTTCTGCAAGTATGAGCATGATGACATTGTGTCTACGGTCAGTGTCC
TGAGCTCTGGCACACAAGCTGTCAGTGGTAGCAAAGACTTCTGCATCAAGGTTTGGGACCTTGCTCAGCAGGTGGTACTG
AATTCATACCGAGCTCATGCTGCGCAGGTCACCTGTGTCGCTGCTTCTCCCCACAAGGATTCTGTGTTTCTTTCATGCAG
TGAGGACAATAGAATTTTACTTTGGGATACCCGCTGTCCCAAGCCAGCATCACACATTGGTTGCAGTGCCTCTGGCTCCC
TTCCTACCTCACTGGCTTGGCATCCTCAGCAAAGTGAAGTCTTTGTCTTTGGGGACGAAAATGGGATGGTCTCCCTTGTT
GACACCAAGAGTACAAGCTGTGTCCTCAGCTCAGCTGTACATTCCCAGTGTGTCACTGGGCTGGTGTTCTCACCACACAG
TGTTCCTTTCCTGGCCTCTCTCAGTGAAGACTGCTCACTTGCTGTGCTGGACTCAAGCCTTTCTGAGGTGTTTAGAAGCC
GAGCCCACAGAGACTTTGTGAGAGATGCTACTTGGTCCCCGCTCAATCACTCGCTGCTTACCACAGTGGGCTGGGACCAC
CAGGTCGTCCACCACATTGTGCCCACAGAACCTCTCCCAGCCCCTGGACCTGCGAGTGTTGCTGAGTAG
| Library | Parental gene expression (RPM) |
|---|---|
| SRP051959_spleen | 3 .74 RPM |
| SRP051959_skeletal_muscle | 10 .22 RPM |
| SRP051959_lymph_node | 4 .31 RPM |
| SRP051959_lung | 4 .41 RPM |
| SRP051959_liver | 7 .43 RPM |
| SRP051959_kidney | 7 .61 RPM |
| SRP051959_heart | 4 .86 RPM |
| SRP051959_colon | 5 .28 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Bos taurus | ENSBTAG00000014102 | ortholog_one2one | 1 retrogene | |
| Choloepus hoffmanni | ENSCHOG00000013829 | ortholog_one2one | 1 retrogene | |
| Dasypus novemcinctus | ENSDNOG00000006521 | ortholog_one2one | 1 retrogene | |
| Homo sapiens | ENSG00000116455 | ortholog_one2one | 1 retrogene | |
| Gorilla gorilla | ENSGGOG00000005208 | ortholog_one2one | 1 retrogene | |
| Macaca mulatta | ENSMMUG00000003311 | ortholog_one2one | 1 retrogene | |
| Mus musculus | ENSMUSG00000000561 | ortholog_one2one | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000003918 | ortholog_one2one | 1 retrogene | |
| Oryctolagus cuniculus | ENSOCUG00000007801 | ortholog_one2one | 1 retrogene | |
| Pongo abelii | ENSPPYG00000001033 | ortholog_one2one | 1 retrogene | |
| Pan troglodytes | ENSPTRG00000001098 | ortholog_one2one | 1 retrogene | |
| Tupaia belangeri | ENSTBEG00000010325 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_cjac_1166 | 84.97 | 100.00 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_cjac_3063 | 94.74 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSCJAG00000013344 retrocopies