Parental gene: | CAB39, ENSCJAG00000013349 |
| Aliases: | None |
| Description: | calcium binding protein 39 [Source:HGNC Symbol;Acc:20292] |
| Organism: | Marmoset (Callithrix jacchus) |
| Coordinates: | 6:147161750..147265158(+) |
>ENSCJAG00000013349
ATGCCGTTCCCGTTCGGGAAGTCTCACAAATCTCCAGCAGACATTGTGAAGAATCTGAAGGAAAGCATGGCCGTTCTGGA
AAAGCAAGACATTTCTGACAAAAAAGCAGAAAAGGCTACAGAAGAAGTTTCCAAAAATCTGGTTGCCATGAAAGAAATTC
TGTATGGCACAAATGAAAAAGAGCCTCAGACAGAAGCAGTGGCCCAGCTTGCTCAAGAACTCTATAATAGTGGGCTTCTT
AGCACCCTGGTAGCTGATTTACAGCTCATTGACTTTGAGGGCAAAAAAGACGTGGCTCAAATTTTCAACAATATTCTCAG
AAGACAAATTGGTACAAGAACTCCTACTGTTGAATACATCTGCACCCAACAGAATATTTTGTTCATGTTATTGAAAGGGT
ATGAATCTCCAGAAATAGCTTTAAATTGTGGAATAATGTTAAGAGAATGCATCAGACATGAACCACTTGCAAAAATCATT
TTGTGGTCAGAACAGTTTTATGATTTCTTCAGATATGTCGAAATGTCAACATTTGACATAGCTTCAGATGCATTTGCCAC
ATTCAAGGATTTACTTACAAGACATAAATTGCTCAGTGCAGAATTTTTGGAACAGCATTATGATAGATTTTTCAGTGAAT
ATGAGAAGTTACTTCATTCAGAAAATTACGTGACAAAAAGACAGTCACTCAAGCTTCTCGGTGAACTACTACTAGACAGA
CACAACTTCACAATTATGACAAAATACATCAGTAAACCTGAGAACCTCAAGTTAATGATGAACCTGCTGCGAGACAAAAG
TCGCAACATCCAGTTTGAGGCCTTTCACGTTTTTAAGGTGTTTGTAGCCAATCCTAACAAGACACAGCCCATCCTAGACA
TCCTCCTCAAGAACCAGACCAAACTCATAGAGTTCCTCAGCAAGTTTCAGAATGACAGGACGGAGGATGAGCAGTTTAAT
GACGAGAAGACCTATTTAGTTAAACAGATCAGGGATTTGAAGAGACCAGCTCAGCAAGAAGCTTAA
ATGCCGTTCCCGTTCGGGAAGTCTCACAAATCTCCAGCAGACATTGTGAAGAATCTGAAGGAAAGCATGGCCGTTCTGGA
AAAGCAAGACATTTCTGACAAAAAAGCAGAAAAGGCTACAGAAGAAGTTTCCAAAAATCTGGTTGCCATGAAAGAAATTC
TGTATGGCACAAATGAAAAAGAGCCTCAGACAGAAGCAGTGGCCCAGCTTGCTCAAGAACTCTATAATAGTGGGCTTCTT
AGCACCCTGGTAGCTGATTTACAGCTCATTGACTTTGAGGGCAAAAAAGACGTGGCTCAAATTTTCAACAATATTCTCAG
AAGACAAATTGGTACAAGAACTCCTACTGTTGAATACATCTGCACCCAACAGAATATTTTGTTCATGTTATTGAAAGGGT
ATGAATCTCCAGAAATAGCTTTAAATTGTGGAATAATGTTAAGAGAATGCATCAGACATGAACCACTTGCAAAAATCATT
TTGTGGTCAGAACAGTTTTATGATTTCTTCAGATATGTCGAAATGTCAACATTTGACATAGCTTCAGATGCATTTGCCAC
ATTCAAGGATTTACTTACAAGACATAAATTGCTCAGTGCAGAATTTTTGGAACAGCATTATGATAGATTTTTCAGTGAAT
ATGAGAAGTTACTTCATTCAGAAAATTACGTGACAAAAAGACAGTCACTCAAGCTTCTCGGTGAACTACTACTAGACAGA
CACAACTTCACAATTATGACAAAATACATCAGTAAACCTGAGAACCTCAAGTTAATGATGAACCTGCTGCGAGACAAAAG
TCGCAACATCCAGTTTGAGGCCTTTCACGTTTTTAAGGTGTTTGTAGCCAATCCTAACAAGACACAGCCCATCCTAGACA
TCCTCCTCAAGAACCAGACCAAACTCATAGAGTTCCTCAGCAAGTTTCAGAATGACAGGACGGAGGATGAGCAGTTTAAT
GACGAGAAGACCTATTTAGTTAAACAGATCAGGGATTTGAAGAGACCAGCTCAGCAAGAAGCTTAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP051959_spleen | 36 .05 RPM |
| SRP051959_skeletal_muscle | 32 .69 RPM |
| SRP051959_lymph_node | 37 .99 RPM |
| SRP051959_lung | 40 .16 RPM |
| SRP051959_liver | 18 .37 RPM |
| SRP051959_kidney | 33 .70 RPM |
| SRP051959_heart | 31 .24 RPM |
| SRP051959_colon | 35 .37 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Equus caballus | ENSECAG00000015288 | ortholog_one2one | 1 retrogene | |
| Otolemur garnettii | ENSOGAG00000002000 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_cjac_4227 | 95.60 | 100.00 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSCJAG00000013349 retrocopies