Parental gene: | NCOA4, ENSCJAG00000013352 |
| Aliases: | None |
| Description: | None |
| Organism: | Marmoset (Callithrix jacchus) |
| Coordinates: | 12:33710388..33730101(+) |
>ENSCJAG00000013352
ATGAATACCTTCCAAGACCAGAGTGGCAGCTCCAGTAATAGAGAACCCCTTTTGAGATGTAGTGATGCACGGAGGGACTT
GGAACTTGCTATTGGTGGAGTTCTCCGGGCTGAGCAGCAAATTAAAGATAACTTGCGAGAGGTCAAAGCTCAGATTCACA
GTTGCATAAGCCGTCACCTGGAATGCCTTAGAAGCCGTGAGGTGTGGCTATACGAACAGGTGGACCTCATCTATCAGCTT
AAAGAGGAGACACTTCAGCAGCAAGCTCAGCAGCTGTACTGGTTATTGGGCCAGTTCAATTGTCTTACTCATCAACTGGA
GTGTACCCAAAACAAAGATCTAGCCAATCAAGTCTCTGTGTGCCTAGAGAGACTGGGCAGTTTGACCCTTAAACCTGAAG
ATTCAACTGTCCTGCTCTTTGAAGCCGACACAACTGCTCTGCGCCAGACCATCACCACCTTTGGGTCTCTCAAAACCATT
CAAATTCCTGAGCACTTGATGGCTCATGCTAGTTCATCAAATATTGGGCCCTTCCTGGAGAAGAGAGGCTATATCCCAAT
GCCAGAGCAGAAGTCAGCATCCAGTATTGCAGCTGTCCCTCTCAGCGAATGGCTCCTTGGAAGCAAACCTGCCAGTGGCT
CTCAGGCTCCTTACATATCCAGCACCAACCCCCAGGACTGGCTCACCCAAAAGCAGACCTTGGAGAATAGTCAGACTTCT
TCCAGAGCCTGCAATTTCTTCAGTAATGTCTGGGGAAACCTAAAGGACTTAGAAAACTGGCTCCTCAAGAGTCAGCAACA
GGAAGTTCCTGAAAAACCAAGTTACCAAAAGTGTAACAGCCATTCTACTGCTGGTTCTTTCTCCACTGAAATGGAAAAGG
TTGAAGATCTAGAGCTTCCCGATCAAGATAAGATGGACTTATCAGATTGGCTGGTGACTCCCCAGGAATCCCATAAGCTG
GGGAAGCCTGAGAATGGCAGTCATGAAATCAGTGAGAAGTTTAAGCTCTTGTTCCAGTCCTATAATGTGAATGATTGGCT
TGTCAAGACTGACTCCTGTACCAACTGTCAGGGAAACCAGCCCAAAGGTGTAGAGATTGAAAACCTGGGCAATCTGAAGT
GCCTGAATGACCACTTGGAGGCCAAGAAACCATTGTCCACCACCAGTGTGGTTACAGAGGATTGGCTTGTCCAGAACCGT
CAGGACCCATGTAAGGTAGAGGAGGTGTGCAGAGCCAATGAGCCCTGCACAAGCTTTGCAGAGTGTGTGTGTGATGAGAA
TTGTGAGAAGGAGGCTCTGTATAAATGGCTTCTGAAGAAAGAAGGAAAGGATAAAAATGGGATGCCCATGGAACCCAAAC
CTGAGCCTGAGAAGCATAAAGATTCCCTGAATATGTGGCTCTGTCCTTCTAGAAAAGAAGTAATAGAACAACCTAAAGCA
CCAAAGGCAATGGTTCCTTCTAGAATTGCTGATTCCTTCCAAGTCATAAAGAACAGCCCCTTGTCGGAGTGGCTTATCAG
GCCTCTAAACAAAGAAGGAAGTCCCAAGGAAGTGCCTAGTACTGAAGACAGAGCTGGTAAACAAAAGCTTAAAAGCCCCA
TGAGCACTTTCTGGTGTCCCTTTAATACAGCAGACTGGGTCCTGCCAGGAAAAAAGATGGGCAACGTCAGCCAGTTATCC
TCTGGAGAAGACAAGTGGCTGCTTCGAAAGAAGGCCCAGGAAGTATTACTTAATTCACCTCTACAGGAGGAACGTAAGTT
CCCCCCAGACCATTACGGCCTCCCTGCAGTTTGCGATCTCTTTGCCTGTATGCAGCTTAAAGTTGATAAAGAGAAGTGGT
TATATCGAACTCCTCTACAGGTGGATGTGAAGACAAGAGTTGAACCGCCTTTCTGCCAGTTATCACACATCATGAGCTGG
GTGACTGCGGCTTGCCAAATCATTGTGTTTCTGGGTCTGACCAATTAG
ATGAATACCTTCCAAGACCAGAGTGGCAGCTCCAGTAATAGAGAACCCCTTTTGAGATGTAGTGATGCACGGAGGGACTT
GGAACTTGCTATTGGTGGAGTTCTCCGGGCTGAGCAGCAAATTAAAGATAACTTGCGAGAGGTCAAAGCTCAGATTCACA
GTTGCATAAGCCGTCACCTGGAATGCCTTAGAAGCCGTGAGGTGTGGCTATACGAACAGGTGGACCTCATCTATCAGCTT
AAAGAGGAGACACTTCAGCAGCAAGCTCAGCAGCTGTACTGGTTATTGGGCCAGTTCAATTGTCTTACTCATCAACTGGA
GTGTACCCAAAACAAAGATCTAGCCAATCAAGTCTCTGTGTGCCTAGAGAGACTGGGCAGTTTGACCCTTAAACCTGAAG
ATTCAACTGTCCTGCTCTTTGAAGCCGACACAACTGCTCTGCGCCAGACCATCACCACCTTTGGGTCTCTCAAAACCATT
CAAATTCCTGAGCACTTGATGGCTCATGCTAGTTCATCAAATATTGGGCCCTTCCTGGAGAAGAGAGGCTATATCCCAAT
GCCAGAGCAGAAGTCAGCATCCAGTATTGCAGCTGTCCCTCTCAGCGAATGGCTCCTTGGAAGCAAACCTGCCAGTGGCT
CTCAGGCTCCTTACATATCCAGCACCAACCCCCAGGACTGGCTCACCCAAAAGCAGACCTTGGAGAATAGTCAGACTTCT
TCCAGAGCCTGCAATTTCTTCAGTAATGTCTGGGGAAACCTAAAGGACTTAGAAAACTGGCTCCTCAAGAGTCAGCAACA
GGAAGTTCCTGAAAAACCAAGTTACCAAAAGTGTAACAGCCATTCTACTGCTGGTTCTTTCTCCACTGAAATGGAAAAGG
TTGAAGATCTAGAGCTTCCCGATCAAGATAAGATGGACTTATCAGATTGGCTGGTGACTCCCCAGGAATCCCATAAGCTG
GGGAAGCCTGAGAATGGCAGTCATGAAATCAGTGAGAAGTTTAAGCTCTTGTTCCAGTCCTATAATGTGAATGATTGGCT
TGTCAAGACTGACTCCTGTACCAACTGTCAGGGAAACCAGCCCAAAGGTGTAGAGATTGAAAACCTGGGCAATCTGAAGT
GCCTGAATGACCACTTGGAGGCCAAGAAACCATTGTCCACCACCAGTGTGGTTACAGAGGATTGGCTTGTCCAGAACCGT
CAGGACCCATGTAAGGTAGAGGAGGTGTGCAGAGCCAATGAGCCCTGCACAAGCTTTGCAGAGTGTGTGTGTGATGAGAA
TTGTGAGAAGGAGGCTCTGTATAAATGGCTTCTGAAGAAAGAAGGAAAGGATAAAAATGGGATGCCCATGGAACCCAAAC
CTGAGCCTGAGAAGCATAAAGATTCCCTGAATATGTGGCTCTGTCCTTCTAGAAAAGAAGTAATAGAACAACCTAAAGCA
CCAAAGGCAATGGTTCCTTCTAGAATTGCTGATTCCTTCCAAGTCATAAAGAACAGCCCCTTGTCGGAGTGGCTTATCAG
GCCTCTAAACAAAGAAGGAAGTCCCAAGGAAGTGCCTAGTACTGAAGACAGAGCTGGTAAACAAAAGCTTAAAAGCCCCA
TGAGCACTTTCTGGTGTCCCTTTAATACAGCAGACTGGGTCCTGCCAGGAAAAAAGATGGGCAACGTCAGCCAGTTATCC
TCTGGAGAAGACAAGTGGCTGCTTCGAAAGAAGGCCCAGGAAGTATTACTTAATTCACCTCTACAGGAGGAACGTAAGTT
CCCCCCAGACCATTACGGCCTCCCTGCAGTTTGCGATCTCTTTGCCTGTATGCAGCTTAAAGTTGATAAAGAGAAGTGGT
TATATCGAACTCCTCTACAGGTGGATGTGAAGACAAGAGTTGAACCGCCTTTCTGCCAGTTATCACACATCATGAGCTGG
GTGACTGCGGCTTGCCAAATCATTGTGTTTCTGGGTCTGACCAATTAG
| Library | Parental gene expression (RPM) |
|---|---|
| SRP051959_spleen | 86 .85 RPM |
| SRP051959_skeletal_muscle | 59 .99 RPM |
| SRP051959_lymph_node | 45 .25 RPM |
| SRP051959_lung | 60 .08 RPM |
| SRP051959_liver | 115 .95 RPM |
| SRP051959_kidney | 126 .77 RPM |
| SRP051959_heart | 56 .99 RPM |
| SRP051959_colon | 80 .45 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Bos taurus | ENSBTAG00000019565 | ortholog_one2many | 1 retrogene | |
| Choloepus hoffmanni | ENSCHOG00000004343 | ortholog_one2many | 1 retrogene | |
| Myotis lucifugus | ENSMLUG00000000619 | ortholog_one2many | 1 retrogene | |
| Mus musculus | ENSMUSG00000056234 | ortholog_many2many | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_cjac_916 | 86.52 | 94.81 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSCJAG00000013352 retrocopies