Parental gene: | SGCE, ENSCJAG00000013426 |
| Aliases: | None |
| Description: | sarcoglycan, epsilon [Source:HGNC Symbol;Acc:10808] |
| Organism: | Marmoset (Callithrix jacchus) |
| Coordinates: | 8:52831493..52909276(+) |
>ENSCJAG00000013426
ATGCTATTGCCCCGGTGGTGGGAGCTGGGAGACCCCTGTGCTTGGACGGGACAGGGTCGGGGGGCACGCAGGATGAGCCC
CGCGACTACTGGCACATTCTTGCTGACAGGCGAGATCAGTAATGATCCCATAACATTTAATACAAATTTAATGGGTTACC
CAGACCGACCTGGATGGCTTCGATATATCCAAAGGACACCATATAGTGATGGAGTCCTATATGGGTCTCCAACAGCTGAA
AATGTGGGAAAACCAACAATCATTGAGATAACTGCCTACAATAGGCGCACCTTTGAGACTGCAAGGCATAATTTGATAAT
TAATATAATGTCTGCAGAAGACTTCCCATTGCCATATCAAGCAGAATTCTTCATTAAGAATATGAATGTAGAAGAAATGT
TGGCCAGTGAGGTTCTTGGAGACTTTCTTGGGGCAGTGAAAAATGTGTGGCAGCCGGAGCGACTGAACGCCATAAACATC
ACATCGGCCCTAGACAGGGGCGGCAGGGTGCCACTTCCCATTAACAACCTGAAGGAGGGCGTTTATGTCATGGTTGGTGC
AGATGTCCCATTTTCTTCTTGTTTACGAGAAGTTGAAAATCCACAGAATCAGTTGAGATGCAGTCAAGAAATGGAGCCTG
TAATAACATGTGATAAAAAATTTCGTACTCAATTTTACATTGACTGGTGCAAAATTTCATTGGTTGATAAAACAAAGCAA
GTGTCCACCTATCAGGAAGTGATTCGTGGAGAGGGGATTTTACCTGATGGTGGAGAATACAAACCCCCATCTGATTCTTT
GAAAAGCAGAGACTATTACACGGATTTCCTAATTACACTGGCTGTGCCCTCGGCAGTAGCACTGGTCCTTTTTCTAATAC
TCGCTTATATCATGTGCTGCCGACGGGAAGGAGTGGAAAAGAGAAACATGCAAACACCAGACATCCAACTGGTTCATCAC
AGTGCTATTCAGAAATCTACCAAGGAGCTTCGAGACATGTCCAAGAATAGAGAGATAGCATGGCCCCTGTCAACACTTCC
TGTGTTCCACCCTGTGACTGGAGAAATCATACCTCCTTTACACACAGACAACTATGATAGCACAAACATGCCATTGATGC
AAACGCAGCAGAACTTGCCACATCAGACTCAGATTCCCCAACAGCAGACTACAGGTAAATGGTATCCCTGA
ATGCTATTGCCCCGGTGGTGGGAGCTGGGAGACCCCTGTGCTTGGACGGGACAGGGTCGGGGGGCACGCAGGATGAGCCC
CGCGACTACTGGCACATTCTTGCTGACAGGCGAGATCAGTAATGATCCCATAACATTTAATACAAATTTAATGGGTTACC
CAGACCGACCTGGATGGCTTCGATATATCCAAAGGACACCATATAGTGATGGAGTCCTATATGGGTCTCCAACAGCTGAA
AATGTGGGAAAACCAACAATCATTGAGATAACTGCCTACAATAGGCGCACCTTTGAGACTGCAAGGCATAATTTGATAAT
TAATATAATGTCTGCAGAAGACTTCCCATTGCCATATCAAGCAGAATTCTTCATTAAGAATATGAATGTAGAAGAAATGT
TGGCCAGTGAGGTTCTTGGAGACTTTCTTGGGGCAGTGAAAAATGTGTGGCAGCCGGAGCGACTGAACGCCATAAACATC
ACATCGGCCCTAGACAGGGGCGGCAGGGTGCCACTTCCCATTAACAACCTGAAGGAGGGCGTTTATGTCATGGTTGGTGC
AGATGTCCCATTTTCTTCTTGTTTACGAGAAGTTGAAAATCCACAGAATCAGTTGAGATGCAGTCAAGAAATGGAGCCTG
TAATAACATGTGATAAAAAATTTCGTACTCAATTTTACATTGACTGGTGCAAAATTTCATTGGTTGATAAAACAAAGCAA
GTGTCCACCTATCAGGAAGTGATTCGTGGAGAGGGGATTTTACCTGATGGTGGAGAATACAAACCCCCATCTGATTCTTT
GAAAAGCAGAGACTATTACACGGATTTCCTAATTACACTGGCTGTGCCCTCGGCAGTAGCACTGGTCCTTTTTCTAATAC
TCGCTTATATCATGTGCTGCCGACGGGAAGGAGTGGAAAAGAGAAACATGCAAACACCAGACATCCAACTGGTTCATCAC
AGTGCTATTCAGAAATCTACCAAGGAGCTTCGAGACATGTCCAAGAATAGAGAGATAGCATGGCCCCTGTCAACACTTCC
TGTGTTCCACCCTGTGACTGGAGAAATCATACCTCCTTTACACACAGACAACTATGATAGCACAAACATGCCATTGATGC
AAACGCAGCAGAACTTGCCACATCAGACTCAGATTCCCCAACAGCAGACTACAGGTAAATGGTATCCCTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP051959_spleen | 12 .35 RPM |
| SRP051959_skeletal_muscle | 4 .04 RPM |
| SRP051959_lymph_node | 3 .47 RPM |
| SRP051959_lung | 11 .22 RPM |
| SRP051959_liver | 2 .79 RPM |
| SRP051959_kidney | 9 .16 RPM |
| SRP051959_heart | 12 .63 RPM |
| SRP051959_colon | 9 .34 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Tupaia belangeri | ENSTBEG00000008912 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_cjac_2735 | 61.39 | 64.14 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSCJAG00000013426 retrocopies