Parental gene: | PIGX, ENSCJAG00000013676 |
| Aliases: | None |
| Description: | phosphatidylinositol glycan anchor biosynthesis, class X [Source:HGNC Symbol;Acc:26046] |
| Organism: | Marmoset (Callithrix jacchus) |
| Coordinates: | 15:18228531..18248180(-) |
>ENSCJAG00000013676
CTGGCGGCTTGGGTGGCGGCTGTTCGGGCGGTCGCCTGGCTGCTCCTCGGGGCGGCGACCTGGCTCACGCGCGGGCCCGC
CGCGGCCTTCACTGCCGCAAGCTCTGACGCCGGCATAAGGGCCACGTGTTCTGAAATTACTTTGAGACAAGAAGTTTTGA
AAGATGGTTTCCACAGAGACCTTTTAATAAAAGTGAAGTTTGGAGAAGGCATTGAGGACTTACAGAGGTGCCGACTCTTA
ATTAAACAGAACATTCCTACAGGACTTTTTGTGGATCCATATGAGTTGGCTTCATTACGAGAGAGAAACATAACAGAGGC
AATGATGGTTTCGGAAAATTTTGATGTAGAGGCCCCTAACTATTTGTCCAAGGAATCTGAAGTTCTCATTTATGCCAGAC
GAGATTCACAGTGCATTGATTGTTTTCAAGCCTTTTTGCCTGTGCACTACCGCTATCATCGGCCACATAGTAAAGATGGA
GAAACCTTTACTGTGGTCAGTAACCCAGATTTGTTGATGTATTGTGACCAAGGTAAGGGTTGCAAAGTCACGTTCAACTT
CTGCAATACTTTTGATGCTAAAATAACGTTCTCGATTTTGAAATGCTGGGCTCACTCAGAAGTGGCAGCTCCTTGTGCTT
TGGAGAATGAGGATATCTGCCAGTGGAACAAGATGAAGTATAAATCAGTATATAAGAATGTGATTCTGCAGGTTCCAGTG
GGACTGACTATACATACCTCTTTAGTATGTTCTGTGACTCTGCTCATTACAATCCTGTGCTGTACTTTGATCCTTGTAAC
AGTTTTCAAATATGGCCATTTTTCCCTATAA
CTGGCGGCTTGGGTGGCGGCTGTTCGGGCGGTCGCCTGGCTGCTCCTCGGGGCGGCGACCTGGCTCACGCGCGGGCCCGC
CGCGGCCTTCACTGCCGCAAGCTCTGACGCCGGCATAAGGGCCACGTGTTCTGAAATTACTTTGAGACAAGAAGTTTTGA
AAGATGGTTTCCACAGAGACCTTTTAATAAAAGTGAAGTTTGGAGAAGGCATTGAGGACTTACAGAGGTGCCGACTCTTA
ATTAAACAGAACATTCCTACAGGACTTTTTGTGGATCCATATGAGTTGGCTTCATTACGAGAGAGAAACATAACAGAGGC
AATGATGGTTTCGGAAAATTTTGATGTAGAGGCCCCTAACTATTTGTCCAAGGAATCTGAAGTTCTCATTTATGCCAGAC
GAGATTCACAGTGCATTGATTGTTTTCAAGCCTTTTTGCCTGTGCACTACCGCTATCATCGGCCACATAGTAAAGATGGA
GAAACCTTTACTGTGGTCAGTAACCCAGATTTGTTGATGTATTGTGACCAAGGTAAGGGTTGCAAAGTCACGTTCAACTT
CTGCAATACTTTTGATGCTAAAATAACGTTCTCGATTTTGAAATGCTGGGCTCACTCAGAAGTGGCAGCTCCTTGTGCTT
TGGAGAATGAGGATATCTGCCAGTGGAACAAGATGAAGTATAAATCAGTATATAAGAATGTGATTCTGCAGGTTCCAGTG
GGACTGACTATACATACCTCTTTAGTATGTTCTGTGACTCTGCTCATTACAATCCTGTGCTGTACTTTGATCCTTGTAAC
AGTTTTCAAATATGGCCATTTTTCCCTATAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP051959_spleen | 14 .68 RPM |
| SRP051959_skeletal_muscle | 3 .41 RPM |
| SRP051959_lymph_node | 13 .38 RPM |
| SRP051959_lung | 14 .67 RPM |
| SRP051959_liver | 16 .68 RPM |
| SRP051959_kidney | 11 .34 RPM |
| SRP051959_heart | 8 .75 RPM |
| SRP051959_colon | 10 .38 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Ailuropoda melanoleuca | ENSAMEG00000003759 | ortholog_one2one | 1 retrogene | |
| Monodelphis domestica | ENSMODG00000018455 | ortholog_one2one | 1 retrogene | |
| Mustela putorius furo | ENSMPUG00000003841 | ortholog_one2one | 1 retrogene | |
| Mus musculus | ENSMUSG00000023791 | ortholog_one2one | 1 retrogene | |
| Oryctolagus cuniculus | ENSOCUG00000012329 | ortholog_one2one | 1 retrogene | |
| Rattus norvegicus | ENSRNOG00000033623 | ortholog_one2one | 2 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_cjac_2794 | 84.86 | 100.00 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSCJAG00000013676 retrocopies