Parental gene:

LSG1, ENSCJAG00000013962

Aliases:None
Description:None
Organism:Marmoset (Callithrix jacchus)
Coordinates:15:16359319..16397269(-)


>ENSCJAG00000013962
ATGGGCCGGAGGAGAGCTCCGGCCGGTGGGTCGCTGGGACGGGCCCTTATGCGCCATCAGACTCAGCGGAGCCGAAGCCA
TCGTCACACTGACTCCTGGTTGCACACAAGTGAACTCAATGATGGCTATGATTGGGGTCGTCTTAATCTTCAGTCAGTGA
CTGAACAGAGCTCTCTTGATGACTTCCTTGCTACTGCCGAACTTGCAGGAACAGAGTTTGTTGCTGAGAAACTCAATATT
AAGTTTGTGACAGCTGAGGCTAGAACTGGACTGCTATCTTTTGAGGAGAGCCAGAGAATTAAGAAGCTCCACGAAGAAAA
CAAACAGTTCTTGTGTATACCAAGAAGACCAAACTGGGACAAAAAAACTAGCCCAGAAGAACTCAAACAGGCAGAGAAAG
ATAACTTTCTAGAATGGAGACGTCAGCTTGTCTGGCTAGAAGAGGAACAAAAGCTGATACTGACTCCATTTGAACGAAAT
TTGGACTTCTGGCGCCAGCTCTGGAGAGTCATTGAGAGAAGTGATATTGTGGTCCAGATAGTAGATGCTCGAAACCCACT
CCTGTTCAGATGTGAGGATTTGGAATGTTATGTGAAAGAAATAGATGCCAATAAGGAGAACATCATTCTGATCAACAAGG
CAGACTTGCTGACTGCTGAGCAGCGGAGTGCCTGGGCCACACACTTTGAAAAAGAAGACGTGAAGGTTATTTTCTGGTCA
GCTTTGGCCGGAGGCATTCACCTGAACGCTGACTCTGAGGAAGAGGTAAACAGAGATGATAGACAAAGCAATACAACTGA
GTTTGAAAACTCCAGTTTCGACGAGGCTGAAATTTCACACAGTGAGACCGAACATCTCCCAGCCAGGGACTCTCCTTCAC
GTAGTGAAAATCCCACTACTGATGAAGATGACAGTGAGTATGAGGACTGTCAGGAGGAAGAGGAAGATGACTGGCAGACG
TGTTCAGAAGAAGACAGTCCTGATGAAGAGGACTGTGGCCAGGACTGGAAGGAAAGCTGTATGTCAGATTCTGAGGCTCC
GGGCAGGAACACCCCGCAGAAGAGGCAGATACACAACTTTAGCCATCTGGTATCAAAGCAGGAGTTACTAGAGCTTTTTA
AGGAGCTACACACTGGGAAGAAGGTGAAAGATGGACAACTTACAGTCGGACTGGTGGGCTACCCTAATGTTGGTAAGAGT
TCAACAATCAACACCATCATGGGCAACAAGAAAGTATCTGTGTCTGCCACACCTGGTCACACGAAGCACTTTCAGACACT
CTACGTGGAGCCTGGCCTCTGCCTATGTGACTGCCCAGGCTTGGTGATGCCATCTTTTGTGTCTACCAAGGCAGAAATGA
CTTGCAGCGGAATCCTCCCAATTGATCAGATGAGAGATCACGTTCCGCCTGTATCATTAGTTTGCCAGAATATTCCAAGA
CATGTTTTAGAAGTTACCTATGGGATTAATATCATAAAGCCTAGAGAGGATGAAGATCCCCACCGGCCTGCAACGTCAGA
AGAACTGTTAACAGCTTATGGATATATGCGAGGATTCATGACAGCGCATGGACAGCCAGACCAGCCTCGATCTGCGCGCT
ATATCCTGAAGGACTATGTCAGTGGTAAGCTGCTGTACTGCCATCCTCCTCCTGGAAGAGATCCTGTAACTTTTCAGCAT
CAACACCAGCAACTCCTAGAGAGCAAAACGAATGGAGATGAAATAAAAATACAGCCAGGCAGAAATAAAAAAGCAAAGCA
GATTGAAAATATAGTTGATGAAACCTTTTTCCATCAAGAGAATGTGAGAGCTTTGACCAAAGGAGTCCAGGCTGTGATGG
GTTACAAGCCCGAGAGCAGGATAGTGACTGCGGCTACTGCGAGCTCTGAGAATGGGGCAGGGAAGCCCTGGAAGAAACAT
GGCAACAGAAATAAAAAAGAAAAAAGTCGTAGACTCTATAAGCACCTGGACATGTGA

Library Parental gene expression (RPM)
SRP051959_spleen 26 .83 RPM
SRP051959_skeletal_muscle 24 .92 RPM
SRP051959_lymph_node 24 .73 RPM
SRP051959_lung 27 .70 RPM
SRP051959_liver 24 .50 RPM
SRP051959_kidney 55 .51 RPM
SRP051959_heart 24 .63 RPM
SRP051959_colon 15 .29 RPM



No homologs available

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cjac_586 90.66 66.26
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Download FASTA sequences of all ENSCJAG00000013962 retrocopies