Parental gene:

ENSCJAG00000014008

Aliases:None
Description:None
Organism:Marmoset (Callithrix jacchus)
Coordinates:5:99370129..99545194(+)


>ENSCJAG00000014008
ATGGCAGGCAGTCGATTGGAAACCGTAGGGAGCATCTTCTCGCGGACTCGGGACCTGATGCGGGCTGGGGTGCTGAAGGA
GAAGCCCCTGTGGTTTGACGTATATAACGCCTTTCCCCCTCTGAGAGAGCCCATCTTCCGTAGGCCCCGCTTGCGATATG
GCAAAGCCAAAGCTTCCATCCAGGACATCTGGTACCACGAGGATCGGATCAGAGCGAAGTTTTATTCAGCGTATGGGTCT
GGTCAAAGAGCTTTTGATCTGTTCAATCCAAACTTCAAGTCTACCTGTCAACGGTTTGTGGAGAAGTATACTGAGCTGCA
GAAACTTGGAGAAACAGACGAAGAGAAGTTATTTGTGGAAACAGGGAAGGCTTTATTGGCAGAAGGTATCATTTTAAGAC
GAGTAGGCGAAGCAAGGACTCAACAGCAAGGTCACGTTTCCCAGAAATCTGAACACTTGAGTGTCAGACCACAGACGACG
TCGGAAGAAGATGAGCCTCAGAAAGAAGCACCTCAGGACCAGCATTTGGAGGCACCTGCAGACCAGTCAAAAGGTCTCTC
GCCTCCCTGA

Library Parental gene expression (RPM)
SRP051959_colon 6 .39 RPM
SRP051959_heart 8 .86 RPM
SRP051959_kidney 9 .96 RPM
SRP051959_liver 8 .86 RPM
SRP051959_lung 7 .40 RPM
SRP051959_lymph_node 9 .41 RPM
SRP051959_skeletal_muscle 12 .38 RPM
SRP051959_spleen 8 .93 RPM



Species Parental gene accession Homology type Retrogenes number
Cavia porcellus ENSCPOG00000008761 ortholog_one2many 1 retrogene
retro_cpor_1175,
Felis catus ENSFCAG00000005711 ortholog_one2many 1 retrogene
retro_fcat_963,
Homo sapiens ENSG00000181610 ortholog_one2many 1 retrogene
retro_hsap_3727,
Macaca mulatta ENSMMUG00000001913 ortholog_one2many 1 retrogene
retro_mmul_1691,
Mustela putorius furo ENSMPUG00000015372 ortholog_one2many 1 retrogene
retro_mputfur_1274,
Nomascus leucogenys ENSNLEG00000008072 ortholog_many2many 1 retrogene
retro_nleu_1972,
Pongo abelii ENSPPYG00000025941 ortholog_one2many 1 retrogene
retro_pabe_3131,
Pan troglodytes ENSPTRG00000009440 ortholog_one2many 1 retrogene
retro_ptro_2523,
Tarsius syrichta ENSTSYG00000009862 ortholog_one2many 1 retrogene
retro_tsyr_2077,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cjac_3047 73.79 52.91
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Download FASTA sequences of all ENSCJAG00000014008 retrocopies