Parental gene: | RAB8A, ENSCJAG00000014120 |
| Aliases: | None |
| Description: | RAB8A, member RAS oncogene family [Source:HGNC Symbol;Acc:7007] |
| Organism: | Marmoset (Callithrix jacchus) |
| Coordinates: | 22:15084796..15110474(+) |
>ENSCJAG00000014120
ATGGCGAAGACCTACGATTACCTGTTCAAGCTGCTGCTGATCGGGGACTCGGGGGTGGGGAAGACCTGTGTCCTGTTCCG
CTTCTCCGAGGACGCCTTCAACTCCACGTTTATCTCCACCATAGGAATTGACTTTAAAATTAGGACCATAGAGCTCGATG
GCAAGAGAATTAAGCTGCAGATATGGGACACAGCCGGTCAGGAGCGGTTTCGGACGATCACAACAGCCTACTACAGGGGC
GCGATGGGCATCATGCTGGTTTATGACATCACCAACGAGAAGTCCTTTGACAACATCCGGAACTGGATTCGAAACATTGA
GGAGCACGCCTCTGCAGATGTCGAAAAGATGATACTCGGGAACAAGTGTGATGTGAATGACAAGAGACAAGTTTCCAAGG
AACGGGGAGAAAAGCTAGCCCTCGACTATGGAATCAAGTTCATGGAGACCAGCGCGAAGGCCAACATCAACGTGGAAAAC
GCATTTTTCACTCTTGCCAGAGACATCAAAGCAAAAATGGACAAAAAATTGGAAGGCAACAGCCCCCAGGGGAGTAACCA
GGGAGTCAAAATCACACCAGACCAGCAGAAGAGGAGCAGCTTTTTCCGATGTGTTCTTCTGTGA
ATGGCGAAGACCTACGATTACCTGTTCAAGCTGCTGCTGATCGGGGACTCGGGGGTGGGGAAGACCTGTGTCCTGTTCCG
CTTCTCCGAGGACGCCTTCAACTCCACGTTTATCTCCACCATAGGAATTGACTTTAAAATTAGGACCATAGAGCTCGATG
GCAAGAGAATTAAGCTGCAGATATGGGACACAGCCGGTCAGGAGCGGTTTCGGACGATCACAACAGCCTACTACAGGGGC
GCGATGGGCATCATGCTGGTTTATGACATCACCAACGAGAAGTCCTTTGACAACATCCGGAACTGGATTCGAAACATTGA
GGAGCACGCCTCTGCAGATGTCGAAAAGATGATACTCGGGAACAAGTGTGATGTGAATGACAAGAGACAAGTTTCCAAGG
AACGGGGAGAAAAGCTAGCCCTCGACTATGGAATCAAGTTCATGGAGACCAGCGCGAAGGCCAACATCAACGTGGAAAAC
GCATTTTTCACTCTTGCCAGAGACATCAAAGCAAAAATGGACAAAAAATTGGAAGGCAACAGCCCCCAGGGGAGTAACCA
GGGAGTCAAAATCACACCAGACCAGCAGAAGAGGAGCAGCTTTTTCCGATGTGTTCTTCTGTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP051959_spleen | 17 .12 RPM |
| SRP051959_skeletal_muscle | 2 .16 RPM |
| SRP051959_lymph_node | 14 .02 RPM |
| SRP051959_lung | 11 .66 RPM |
| SRP051959_liver | 9 .44 RPM |
| SRP051959_kidney | 11 .85 RPM |
| SRP051959_heart | 5 .79 RPM |
| SRP051959_colon | 14 .27 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Callithrix jacchus | ENSCJAG00000001599 | other_paralog | 1 retrogene | |
| Otolemur garnettii | ENSOGAG00000013894 | ortholog_one2one | 1 retrogene | |
| Pteropus vampyrus | ENSPVAG00000009756 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_cjac_1494 | 83.70 | 65.22 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSCJAG00000014120 retrocopies