Parental gene: | ISYNA1, ENSCJAG00000014230 |
| Aliases: | None |
| Description: | None |
| Organism: | Marmoset (Callithrix jacchus) |
| Coordinates: | 22:17503772..17589562(-) |
>ENSCJAG00000014230
ATGGAGGCCGCCGCCCAGTTCTTCGTCGAGAGCCCGGACGTGGTCTACGGCCCGGAGGCTATCGAGGCGCAATACGAGTA
CCGGACGACGCGCGTCAGCCGCGAGGGCGGCGTCCTCAAGGTGCACCCCACGACCACGCGCTTCACCTTCCGGACCGTTC
GGCAGGTGCCCCGGCTCGGGGTCATGCTTGTCGGCTGGGGCGGGAACAACGGCTCCACGCTCACCGCCGCGGTGCTGGCC
AACCGACTGCGTCTGTCCTGGCCCACGCGCAGCGGCCGCAAGGAAGCCAACTACTACGGCTCGCTGACTCAGGCGGGCAC
CGTGAGCCTGGGCTTGGACGCCGAGGGCCAGGAGGTGTTCGTGCCCTTCAGTGCGCTGCTGCCCATGGTGGCACCCAACG
ACCTCGTGTTTGATGGCTGGGACATCTCGTCGATGAACCTCGCCGAGGCGATGCGGCGCGCGAAGGTGCTGGATTGGGAG
CTGCAGGAGCAACTGTGGCCACACATGGAAGCCCTGCGGCCTCGGCCTTCCGTCTACATCCCCGAGTTCATCGCGGCCAA
CCAGAGCACACGCGCGGACAACCTCATCCCGGGCTCGCGCGCGCAGCAGCTGGAGCAGATCCGCAAGGACATCCGAGACT
TCCGGTCTAGCGCGGGTCTGGACAAAGTCGTCGTGCTGTGGACGGCCAACACAGAGCGCTTCTGTGAGGTGGTTCCAGGT
CTCAACGACACGGCCGAGAACCTGCTGCGCACCATTGAGCTTGGCCTGGAGGTGTCTCCCTCCACGCTCTTCGCCGTCGC
CAGCATCCTGGAGGGCTGTGCCTTCCTCAATGGGTCCCCGCAGAACACCCTGGTGCCCGGAGCTCTTGAGCTCGCGTGTC
AGCGCCGGGTTTTCGTGGGTGGAGATGACTTTAAGTCTGGCCAGACCAAAGTCAAGTCCGTGCTCGTGGACTTCCTCATT
AGCTCTGGCCTCAAGACCATGTCCATCGTGAGTTACAACCACCTGGGCAACAATGATGGGCAGAACCTGTCGGCGCCATT
GCAGTTCCGCTCTAAGGAGGTGTCCAAGAGCAACGTGGTGGACGACATGGTGCAGAGTAACCCAGTGCTCTATATGCCCG
GCGAGGAACCCGACCACTGCGTGGTCATCAAGTACGTGCCATACGTGGGCGACAGCAAGCGCGCGCTGGATGAGTATACC
TCGGAGCTAATGCTGGGTGGGACCAACACGCTGGTGCTGCACAACACGTGTGAGGATTCCCTGCTGGCCGCACCCATCAT
GCTAGACCTGGCGCTGCTGACCGAGCTGTGCCAGCGCGTGAGCTTCTGCACTGACGCTGACCCTGAGCCGCAGACCTTCC
ACCCCGTGCTGTCCCTGCTCAGCTTCCTCTTCAAGGCGCCGCTGGTGCCGCCGGGCAGCCCGGTGATCAATGCGCTTTTC
CGCCAGCGCAGCTGCATCGAGAACATCCTCAGGGCCTGCGTGGGGCTCCCGCCACAGAACCACATGCTCCTGGAGCATAA
GATGGAGCGCTCAGGGCCCAGCCTCAAGCAAGTCGGACCCCTGACTGCTGCCTGCCCTGTGTTGAACAAGAAAGGACCGG
TACCCATTTCCACCAACGGCTGCACTGGTGATGCCAATGGGCACCCACAAGTGGAGGAACCCTCAATGCTCACCACCTGA
ATGGAGGCCGCCGCCCAGTTCTTCGTCGAGAGCCCGGACGTGGTCTACGGCCCGGAGGCTATCGAGGCGCAATACGAGTA
CCGGACGACGCGCGTCAGCCGCGAGGGCGGCGTCCTCAAGGTGCACCCCACGACCACGCGCTTCACCTTCCGGACCGTTC
GGCAGGTGCCCCGGCTCGGGGTCATGCTTGTCGGCTGGGGCGGGAACAACGGCTCCACGCTCACCGCCGCGGTGCTGGCC
AACCGACTGCGTCTGTCCTGGCCCACGCGCAGCGGCCGCAAGGAAGCCAACTACTACGGCTCGCTGACTCAGGCGGGCAC
CGTGAGCCTGGGCTTGGACGCCGAGGGCCAGGAGGTGTTCGTGCCCTTCAGTGCGCTGCTGCCCATGGTGGCACCCAACG
ACCTCGTGTTTGATGGCTGGGACATCTCGTCGATGAACCTCGCCGAGGCGATGCGGCGCGCGAAGGTGCTGGATTGGGAG
CTGCAGGAGCAACTGTGGCCACACATGGAAGCCCTGCGGCCTCGGCCTTCCGTCTACATCCCCGAGTTCATCGCGGCCAA
CCAGAGCACACGCGCGGACAACCTCATCCCGGGCTCGCGCGCGCAGCAGCTGGAGCAGATCCGCAAGGACATCCGAGACT
TCCGGTCTAGCGCGGGTCTGGACAAAGTCGTCGTGCTGTGGACGGCCAACACAGAGCGCTTCTGTGAGGTGGTTCCAGGT
CTCAACGACACGGCCGAGAACCTGCTGCGCACCATTGAGCTTGGCCTGGAGGTGTCTCCCTCCACGCTCTTCGCCGTCGC
CAGCATCCTGGAGGGCTGTGCCTTCCTCAATGGGTCCCCGCAGAACACCCTGGTGCCCGGAGCTCTTGAGCTCGCGTGTC
AGCGCCGGGTTTTCGTGGGTGGAGATGACTTTAAGTCTGGCCAGACCAAAGTCAAGTCCGTGCTCGTGGACTTCCTCATT
AGCTCTGGCCTCAAGACCATGTCCATCGTGAGTTACAACCACCTGGGCAACAATGATGGGCAGAACCTGTCGGCGCCATT
GCAGTTCCGCTCTAAGGAGGTGTCCAAGAGCAACGTGGTGGACGACATGGTGCAGAGTAACCCAGTGCTCTATATGCCCG
GCGAGGAACCCGACCACTGCGTGGTCATCAAGTACGTGCCATACGTGGGCGACAGCAAGCGCGCGCTGGATGAGTATACC
TCGGAGCTAATGCTGGGTGGGACCAACACGCTGGTGCTGCACAACACGTGTGAGGATTCCCTGCTGGCCGCACCCATCAT
GCTAGACCTGGCGCTGCTGACCGAGCTGTGCCAGCGCGTGAGCTTCTGCACTGACGCTGACCCTGAGCCGCAGACCTTCC
ACCCCGTGCTGTCCCTGCTCAGCTTCCTCTTCAAGGCGCCGCTGGTGCCGCCGGGCAGCCCGGTGATCAATGCGCTTTTC
CGCCAGCGCAGCTGCATCGAGAACATCCTCAGGGCCTGCGTGGGGCTCCCGCCACAGAACCACATGCTCCTGGAGCATAA
GATGGAGCGCTCAGGGCCCAGCCTCAAGCAAGTCGGACCCCTGACTGCTGCCTGCCCTGTGTTGAACAAGAAAGGACCGG
TACCCATTTCCACCAACGGCTGCACTGGTGATGCCAATGGGCACCCACAAGTGGAGGAACCCTCAATGCTCACCACCTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP051959_spleen | 5 .17 RPM |
| SRP051959_skeletal_muscle | 0 .76 RPM |
| SRP051959_lymph_node | 11 .21 RPM |
| SRP051959_lung | 7 .01 RPM |
| SRP051959_liver | 0 .93 RPM |
| SRP051959_kidney | 2 .64 RPM |
| SRP051959_heart | 2 .49 RPM |
| SRP051959_colon | 0 .55 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Homo sapiens | ENSG00000105655 | ortholog_one2one | 1 retrogene | |
| Gorilla gorilla | ENSGGOG00000016939 | ortholog_one2one | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000006026 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_cjac_435 | 87.46 | 93.00 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_cjac_2768 | 86.02 | 92.16 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_cjac_2803 | 85.85 | 55.64 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_cjac_2809 | 93.11 | 76.36 | Please wait, loading | Please wait, loading | Please wait, loading |
| 5. | retro_cjac_2831 | 84.85 | 92.16 | Please wait, loading | Please wait, loading | Please wait, loading |
| 6. | retro_cjac_3817 | 88.77 | 50.63 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSCJAG00000014230 retrocopies