Parental gene:

ENSCJAG00000014890

Aliases:None
Description:None
Organism:Marmoset (Callithrix jacchus)
Coordinates:11:60366375..60431330(-)


>ENSCJAG00000014890
ATGACTTCCCCTGAAATTGCTTCCTTATCATGGGGGCAAATGAAAGTACAAGGCTCTAATACAACCTATAAGGACTGCAA
AGTATGGCCAGGGGGCAGTCGGACTTGGGATTGGAGAGAAACAGGAACTGAGCATTCTCCTGGAGTGCAGCCTGCAGATG
TGAAGGAAGTTGTTGAGAAAGGTATACAGACTCTTGTGATTGGCCGAGGGATGAGTGAGGCCTTGAAGGTTCCTTCATCA
ACTGTGGAGTACCTCAAGAAACATGGCATTGATGTGCGGGTCCTCCAGACAGAGCAGGCAGTGAAGGAGTATAATGCCTT
GGTTGCCCAAGGGGTCAGGGTGGGAGGTGTCTTCCATTCCACCTGCTGA

Library Parental gene expression (RPM)
SRP051959_spleen 4 .16 RPM
SRP051959_skeletal_muscle 7 .88 RPM
SRP051959_lymph_node 2 .26 RPM
SRP051959_lung 4 .52 RPM
SRP051959_liver 16 .59 RPM
SRP051959_kidney 13 .42 RPM
SRP051959_heart 8 .33 RPM
SRP051959_colon 2 .11 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000002128 ortholog_one2many 1 retrogene
retro_amel_1604,
Echinops telfairi ENSETEG00000006423 ortholog_one2many 1 retrogene
retro_etel_187,
Felis catus ENSFCAG00000007450 ortholog_many2many 1 retrogene
retro_fcat_8,
Loxodonta africana ENSLAFG00000000518 ortholog_one2many 1 retrogene
retro_lafr_784,
Microcebus murinus ENSMICG00000000300 ortholog_one2many 2 retrogenes
retro_mmur_157, retro_mmur_424,
Mustela putorius furo ENSMPUG00000015932 ortholog_one2many 1 retrogene
retro_mputfur_1468,
Rattus norvegicus ENSRNOG00000012584 ortholog_one2many 1 retrogene
retro_rnor_2097,
Tarsius syrichta ENSTSYG00000002262 ortholog_one2many 1 retrogene
retro_tsyr_1886,
Tursiops truncatus ENSTTRG00000007111 ortholog_one2many 1 retrogene
retro_ttru_406,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cjac_165 98.36 100.00
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Download FASTA sequences of all ENSCJAG00000014890 retrocopies