Parental gene:

EIF2S1, ENSCJAG00000015368

Aliases:None
Description:eukaryotic translation initiation factor 2, subunit 1 alpha, 35kDa [Source:HGNC Symbol;Acc:3265]
Organism:Marmoset (Callithrix jacchus)
Coordinates:10:92559258..92581621(+)


>ENSCJAG00000015368
ATGCCGGGTCTAAGTTGTAGATTTTATCAACACAAATTTCCTGAGGTGGAAGATGTAGTGATGGTGAATGTAAGATCCAT
TGCTGAAATGGGTGCTTATGTCAGCTTGCTGGAGTACAACAACATTGAAGGCATGATTCTTCTTAGTGAATTATCCAGAA
GGCGTATCCGTTCTATAAACAAACTCATCCGAATTGGCAGGAATGAGTGTGTGGTTGTCATTAGGGTGGACAAAGAAAAA
GGATATATAGATTTGTCAAAAAGAAGAGTTTCTCCAGAGGAAGCAATCAAATGTGAAGACAAATTCACAAAATCCAAAAC
TGTTTATAGCATTCTTCGTCATGTTGCTGAGGTGTTAGAATACACCAAGGATGAGCAGCTGGAAAGCCTATTCCAGAGGA
CTGCCTGGGTCTTTGATGACAAGTACAAGAGACCTGGATATGGTGCCTATGATGCATTTAAGCATGCAGTCTCAGACCCG
TCTATTTTGGATAGTTTAGATTTGAATGAAGATGAACGGGAAGTACTCATTAATAATATTAATAGACGCTTGACCCCACA
GGCTGTCAAAATTCGAGCGGATATTGAAGTGGCTTGTTATGGTTATGAAGGCATTGATGCTGTAAAAGAAGCCCTAAGAG
CAGGTTTGAATTGTTCTACAGAAACCATGCCCATTAAGATTAATCTAATAGCTCCTCCTCGGTATGTAATGACTACGACA
ACCCTGGAGAGAACAGAAGGCCTTTCTGTCCTCAGTCAGGCAATGGCTGTTATCAAAGAAAAGATTGAGGAAAAGAGGGG
TGTGTTCAATGTTCAAATGGAGCCCAAAGTGGTCACAGATACAGATGAGACTGAACTCGCAAGGCAGATGGAGAGGCTTG
AAAGAGAAAATGCAGAAGTGGATGGAGATGATGATGCAGAAGAAATGGAAGCCAAAGCTGAAGATTAA

Library Parental gene expression (RPM)
SRP051959_spleen 22 .56 RPM
SRP051959_skeletal_muscle 20 .13 RPM
SRP051959_lymph_node 20 .36 RPM
SRP051959_lung 20 .71 RPM
SRP051959_liver 28 .64 RPM
SRP051959_kidney 25 .94 RPM
SRP051959_heart 17 .08 RPM
SRP051959_colon 21 .94 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000016311 ortholog_one2one 1 retrogene
retro_btau_1191,
Cavia porcellus ENSCPOG00000003313 ortholog_one2one 1 retrogene
retro_cpor_1146,
Echinops telfairi ENSETEG00000019003 ortholog_one2one 1 retrogene
retro_etel_279,
Monodelphis domestica ENSMODG00000009911 ortholog_one2one 1 retrogene
retro_mdom_1754,
Mus musculus ENSMUSG00000021116 ortholog_one2one 4 retrogenes
retro_mmus_1342, retro_mmus_1927, retro_mmus_1960, retro_mmus_728,
Oryctolagus cuniculus ENSOCUG00000012023 ortholog_one2one 1 retrogene
retro_ocun_1677,
Rattus norvegicus ENSRNOG00000009432 ortholog_one2one 3 retrogenes
retro_rnor_1234, retro_rnor_1423, retro_rnor_2218,
Sarcophilus harrisii ENSSHAG00000009815 ortholog_one2one 1 retrogene
retro_shar_560,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cjac_2067 91.14 100.00
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Download FASTA sequences of all ENSCJAG00000015368 retrocopies