Parental gene: | HMMR, ENSCJAG00000015371 |
| Aliases: | None |
| Description: | hyaluronan-mediated motility receptor (RHAMM) [Source:HGNC Symbol;Acc:5012] |
| Organism: | Marmoset (Callithrix jacchus) |
| Coordinates: | 2:24615113..24647829(+) |
>ENSCJAG00000015371
ATGTCCTTTCCTAAGGCGCCGCTGAAACGATTCAATGACCCTTCTGGTTGTGCACCATCTCCAGGTGCTTATGATGTTAA
AACTTCAGAGGTATTGAAAGGACCAGTATCCTTTCAGAAATCACAAAGGTTTAAACAACAAAAAGATTCTAAACAAAATC
TTAATGTTGACAAAGATACTACCTTGCCTGCTTCAGCTAGAAAAGTTAAGTCTTCAGAATCAAAGATTCGTGTTCTTATA
CAGGAACGTGGTGCTCAGGACAGGCAGATCCAGGATCTGGAAACGGAGTTGGGAAAGACAGAAGCAAGGCTAAATGCTGC
ATTCAGGGAAAAAACATCTCTCTCTGCAAATAATGCTGCTCTGGAAAAGCAACTTATTGAATTGACCAGGACTAATGAAC
TACTAAAATCTAAGTTTTTGGAAAATGGTAATCAGAAGAATTTGGGAATTCTAAGCTTGGAGCTGATGAAACTTCGAAAC
AAAAGAGAAACAAAGATGAGGGATCTGATGGCTAAGCAAGAAGGCATGGAGATGAAGCTGCAGGTCACCCAAAGGAGTCT
AAAAGAGTCTCAGGGGAAAATAGCCCAACTGGAGGGAAAACTTGTTTCAATAGAGAAAGAAAAGATTGATGAAAAATCTG
AAACAGAAAAACTCTTAGAATATATCCAAGAAATTAGTTGTGCTTCAGATCAAGTGGAAAAATACAAGCTAGATATTGCC
CAGTTAGAAGAAAATTTGAAGGAGAAGAATCATGAAATTTTAAGCCTTAAGCAGTCTCTTGAGGAAAATACTGTTATATT
ATCTAAACAAGTAGAAGACCTAAATGTGAAATGTCAGCTGCTTGAAAAAGAAAAAGAAGATCACGTCAACAAGAATAGAG
AACACAATGAAAATCTAAATGCTGAGATGCAAAACTTAAAACATAAGTTTATTCTTGAGCAACAGGAACTTGAAAAGCTT
CAACAAAAAGAATTACAAGTTAATTCACTTCTGCAACAAGAGAAAGAATTATCTTCTAGTCTTCATGAGAAGCTGTGTTC
CTTTCAAGAGGAAATGGTTAAAGAGAAGAATCTCTTTGAGGAAGAATTAAAACAAGCACTGGATGAGCTTGATAAACTAC
AGCAAAAGGAGGAACAATCTGAACAGCTGGTCAAGCAATTGGAAGAGGAAACAAAATCTAGAGCTGAAGAATTAAAACTC
CTAGAAGAAAAGCTGAAAGGGAAGGAAGCTGAACTGGAGAAAAGTAGTGCTGCTCACACCCAGGCCACCCTGCTCTTGCA
GGAAAAATACAACAGTACAGTGCAAAGCCTTGAAGATGTTACTGCTCAATTTGAAAGCTATAAAGCATTAACAGCCAGTG
AGATTGAAGATCTTAAGCTGCAGAACTCATCATTACAGGAAAAATTGGCCAAGGCTGGAAAAAATGCAGATGATATTCAG
GGTCAGATATTGGCAACCGAGAGTTCAAATCAAGAATATGCAAGGTTGCTTCTAGATCTGCAGACCAAGTCAGCACTAAA
AGAAAGAGAAATTAAAGAAATCACAGTTTCTTCTTTTCAAAAAATAACTGATTTGCAGAACCAACTCCAGCAACAAGAGG
AAGATTTTAGAAAACAACTGGAAGATGAGGAAGCAAGAAAAGCTGGAAAAGAAAATAAAATGGCACAATTAACTGAAGAA
ATTAACAAGTGGCGTCTCCTTTACGAAGAACTGTATAACAAAGTAAAACCTTTCCAGCTACAATTAGATGCTTTTGAAGC
AGAAAAACAGGCATTGTTGAATGAACGTGGTGCTGCTCAGGAAGAGCTAGATAAAATAAGAGATTCATATGCTGAATTA
ATGTCCTTTCCTAAGGCGCCGCTGAAACGATTCAATGACCCTTCTGGTTGTGCACCATCTCCAGGTGCTTATGATGTTAA
AACTTCAGAGGTATTGAAAGGACCAGTATCCTTTCAGAAATCACAAAGGTTTAAACAACAAAAAGATTCTAAACAAAATC
TTAATGTTGACAAAGATACTACCTTGCCTGCTTCAGCTAGAAAAGTTAAGTCTTCAGAATCAAAGATTCGTGTTCTTATA
CAGGAACGTGGTGCTCAGGACAGGCAGATCCAGGATCTGGAAACGGAGTTGGGAAAGACAGAAGCAAGGCTAAATGCTGC
ATTCAGGGAAAAAACATCTCTCTCTGCAAATAATGCTGCTCTGGAAAAGCAACTTATTGAATTGACCAGGACTAATGAAC
TACTAAAATCTAAGTTTTTGGAAAATGGTAATCAGAAGAATTTGGGAATTCTAAGCTTGGAGCTGATGAAACTTCGAAAC
AAAAGAGAAACAAAGATGAGGGATCTGATGGCTAAGCAAGAAGGCATGGAGATGAAGCTGCAGGTCACCCAAAGGAGTCT
AAAAGAGTCTCAGGGGAAAATAGCCCAACTGGAGGGAAAACTTGTTTCAATAGAGAAAGAAAAGATTGATGAAAAATCTG
AAACAGAAAAACTCTTAGAATATATCCAAGAAATTAGTTGTGCTTCAGATCAAGTGGAAAAATACAAGCTAGATATTGCC
CAGTTAGAAGAAAATTTGAAGGAGAAGAATCATGAAATTTTAAGCCTTAAGCAGTCTCTTGAGGAAAATACTGTTATATT
ATCTAAACAAGTAGAAGACCTAAATGTGAAATGTCAGCTGCTTGAAAAAGAAAAAGAAGATCACGTCAACAAGAATAGAG
AACACAATGAAAATCTAAATGCTGAGATGCAAAACTTAAAACATAAGTTTATTCTTGAGCAACAGGAACTTGAAAAGCTT
CAACAAAAAGAATTACAAGTTAATTCACTTCTGCAACAAGAGAAAGAATTATCTTCTAGTCTTCATGAGAAGCTGTGTTC
CTTTCAAGAGGAAATGGTTAAAGAGAAGAATCTCTTTGAGGAAGAATTAAAACAAGCACTGGATGAGCTTGATAAACTAC
AGCAAAAGGAGGAACAATCTGAACAGCTGGTCAAGCAATTGGAAGAGGAAACAAAATCTAGAGCTGAAGAATTAAAACTC
CTAGAAGAAAAGCTGAAAGGGAAGGAAGCTGAACTGGAGAAAAGTAGTGCTGCTCACACCCAGGCCACCCTGCTCTTGCA
GGAAAAATACAACAGTACAGTGCAAAGCCTTGAAGATGTTACTGCTCAATTTGAAAGCTATAAAGCATTAACAGCCAGTG
AGATTGAAGATCTTAAGCTGCAGAACTCATCATTACAGGAAAAATTGGCCAAGGCTGGAAAAAATGCAGATGATATTCAG
GGTCAGATATTGGCAACCGAGAGTTCAAATCAAGAATATGCAAGGTTGCTTCTAGATCTGCAGACCAAGTCAGCACTAAA
AGAAAGAGAAATTAAAGAAATCACAGTTTCTTCTTTTCAAAAAATAACTGATTTGCAGAACCAACTCCAGCAACAAGAGG
AAGATTTTAGAAAACAACTGGAAGATGAGGAAGCAAGAAAAGCTGGAAAAGAAAATAAAATGGCACAATTAACTGAAGAA
ATTAACAAGTGGCGTCTCCTTTACGAAGAACTGTATAACAAAGTAAAACCTTTCCAGCTACAATTAGATGCTTTTGAAGC
AGAAAAACAGGCATTGTTGAATGAACGTGGTGCTGCTCAGGAAGAGCTAGATAAAATAAGAGATTCATATGCTGAATTA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP051959_spleen | 8 .42 RPM |
| SRP051959_skeletal_muscle | 4 .45 RPM |
| SRP051959_lymph_node | 8 .74 RPM |
| SRP051959_lung | 5 .60 RPM |
| SRP051959_liver | 2 .73 RPM |
| SRP051959_kidney | 2 .64 RPM |
| SRP051959_heart | 4 .82 RPM |
| SRP051959_colon | 8 .74 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Canis familiaris | ENSCAFG00000017192 | ortholog_one2one | 1 retrogene | |
| Myotis lucifugus | ENSMLUG00000001674 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_cjac_3328 | 67.32 | 56.77 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSCJAG00000015371 retrocopies