Parental gene: | HCFC1R1, ENSCJAG00000015444 |
| Aliases: | None |
| Description: | host cell factor C1 regulator 1 (XPO1 dependent) [Source:HGNC Symbol;Acc:21198] |
| Organism: | Marmoset (Callithrix jacchus) |
| Coordinates: | 12:3052775..3054422(-) |
>ENSCJAG00000015444
ATGATCCTGGAGCAGCCCTTGGAGCGAGGCCCGCAGGGTGGGGCCCAGCGCCTCCCGCGGGCCGCCTTGGGGGTGACTCG
CGGCCTGGACGCTAGCTCCCCTCTCCGAGGAGCTGTGCCCCTGAGCACCAAGCGGCGCCTGGAGGAGGAGCAGGAGCCTC
TGCGCAAGCAGTTTTTGTCTGAGGAGAACATGGCCACCCATTTCTCTCAACTCAGCCTGCACAATGATCACCCCTACTGC
AGCCCCCCTATGACCTTCCCCCCGGCCCTGCCCCCACTCAGGAGCTCTTGCTCTGAGCTGCTTCTCTGGCGATACCCTGG
CAGCCTCATCCCTGAAGCCCTCCGGTTGCTGAGGCTGGGGGACATCCCCAGTCCCTCCTACCCTTCGACCCCAGCTGGGG
ACATAATGGAGCTCTGA
ATGATCCTGGAGCAGCCCTTGGAGCGAGGCCCGCAGGGTGGGGCCCAGCGCCTCCCGCGGGCCGCCTTGGGGGTGACTCG
CGGCCTGGACGCTAGCTCCCCTCTCCGAGGAGCTGTGCCCCTGAGCACCAAGCGGCGCCTGGAGGAGGAGCAGGAGCCTC
TGCGCAAGCAGTTTTTGTCTGAGGAGAACATGGCCACCCATTTCTCTCAACTCAGCCTGCACAATGATCACCCCTACTGC
AGCCCCCCTATGACCTTCCCCCCGGCCCTGCCCCCACTCAGGAGCTCTTGCTCTGAGCTGCTTCTCTGGCGATACCCTGG
CAGCCTCATCCCTGAAGCCCTCCGGTTGCTGAGGCTGGGGGACATCCCCAGTCCCTCCTACCCTTCGACCCCAGCTGGGG
ACATAATGGAGCTCTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP051959_spleen | 2 .61 RPM |
| SRP051959_skeletal_muscle | 30 .35 RPM |
| SRP051959_lymph_node | 2 .79 RPM |
| SRP051959_lung | 5 .29 RPM |
| SRP051959_liver | 2 .23 RPM |
| SRP051959_kidney | 12 .49 RPM |
| SRP051959_heart | 13 .28 RPM |
| SRP051959_colon | 4 .15 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Ailuropoda melanoleuca | ENSAMEG00000005504 | ortholog_one2one | 1 retrogene | |
| Mus musculus | ENSMUSG00000023904 | ortholog_one2one | 5 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_cjac_1037 | 95.83 | 100.00 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSCJAG00000015444 retrocopies