Parental gene: | PGAP2, ENSCJAG00000015470 |
| Aliases: | None |
| Description: | post-GPI attachment to proteins 2 [Source:HGNC Symbol;Acc:17893] |
| Organism: | Marmoset (Callithrix jacchus) |
| Coordinates: | 11:67123498..67153394(+) |
>ENSCJAG00000015470
ATGTACCAGGTCCCACTGCCACTGGACCGGGATGGGACCCTGGTACGGCTCCGCTTCACCCTGGTGGCCCTGGTCACGGT
CTGCTGTCCACTTGTCGCCTTCCTCTTCTGCATCCTCTGGTCCCTGCTCTTCCACTTCAAGGAGACAACGGCCACACACT
GTGGGGTCACTCCCTACAGGATGTTCTCTGCGGCCTCCCAGCCCTTGGACCCTGATGGGACTGTGTTCCGGCTTCGCTTC
ACAACCATGGTCTGGTGGGTCATCACTTTTCCTGTGTTCGGCTTCTTCTTCTGCATCATCTGGTCCCTGATGTTCCACTT
TGAGTACACGGTGGCCACTGACTGTGGGGTGCCCAATTACCTGCCCTCGGTGAGCTCGGCCATCGGCGGGGAGGTGCCCC
AGCGCTACGTGTGGCGTTTCTGCATCGGCCTGCACTCGGCGCCTCGCTTCTTGGTGGCCTTCGCCTACTGGAACCACTAC
CTCAGCTGTGCCTCCCCGTGTTCCTGCTACCGCCCTCTCTGCCGCATCAACTTCGGCCTCAATGTCGTAGAGAACCTCGC
GTTGCTAGTGCTCACTTACGTCTCCTCCTCTGAGGACTTCACCATCCACGAAAATGCTTTCATTGTGTTCATCGCCTCAT
CCCTCGGGCACATGCTCCTCACCTGCATTCTCTGGCGGCTGACCAAGAAGCACACAGTAAGTCAGGAGGATCGCAAGTCC
TACAGCTGGAAACAGCGGCTCTTCATCATCAACTTCGTCTCTTTCTTCTCGGCGCTGGCTGTCTACCTTCGGCACAACAT
GTATTGTGAGGCTGGAGTGTACACCATCTTTGCCATCCTGGAGTACACTGTTGTCCTAACCAACATGGCGTTCCACATGA
CGGCCTGGTGGGACTTCGGGAATAAGGAGCTGCTCATAACCTCTCAGCCTGAGGAAAAGCGATTCTGA
ATGTACCAGGTCCCACTGCCACTGGACCGGGATGGGACCCTGGTACGGCTCCGCTTCACCCTGGTGGCCCTGGTCACGGT
CTGCTGTCCACTTGTCGCCTTCCTCTTCTGCATCCTCTGGTCCCTGCTCTTCCACTTCAAGGAGACAACGGCCACACACT
GTGGGGTCACTCCCTACAGGATGTTCTCTGCGGCCTCCCAGCCCTTGGACCCTGATGGGACTGTGTTCCGGCTTCGCTTC
ACAACCATGGTCTGGTGGGTCATCACTTTTCCTGTGTTCGGCTTCTTCTTCTGCATCATCTGGTCCCTGATGTTCCACTT
TGAGTACACGGTGGCCACTGACTGTGGGGTGCCCAATTACCTGCCCTCGGTGAGCTCGGCCATCGGCGGGGAGGTGCCCC
AGCGCTACGTGTGGCGTTTCTGCATCGGCCTGCACTCGGCGCCTCGCTTCTTGGTGGCCTTCGCCTACTGGAACCACTAC
CTCAGCTGTGCCTCCCCGTGTTCCTGCTACCGCCCTCTCTGCCGCATCAACTTCGGCCTCAATGTCGTAGAGAACCTCGC
GTTGCTAGTGCTCACTTACGTCTCCTCCTCTGAGGACTTCACCATCCACGAAAATGCTTTCATTGTGTTCATCGCCTCAT
CCCTCGGGCACATGCTCCTCACCTGCATTCTCTGGCGGCTGACCAAGAAGCACACAGTAAGTCAGGAGGATCGCAAGTCC
TACAGCTGGAAACAGCGGCTCTTCATCATCAACTTCGTCTCTTTCTTCTCGGCGCTGGCTGTCTACCTTCGGCACAACAT
GTATTGTGAGGCTGGAGTGTACACCATCTTTGCCATCCTGGAGTACACTGTTGTCCTAACCAACATGGCGTTCCACATGA
CGGCCTGGTGGGACTTCGGGAATAAGGAGCTGCTCATAACCTCTCAGCCTGAGGAAAAGCGATTCTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP051959_spleen | 7 .82 RPM |
| SRP051959_skeletal_muscle | 6 .16 RPM |
| SRP051959_lymph_node | 7 .85 RPM |
| SRP051959_lung | 8 .25 RPM |
| SRP051959_liver | 4 .79 RPM |
| SRP051959_kidney | 7 .70 RPM |
| SRP051959_heart | 5 .84 RPM |
| SRP051959_colon | 4 .30 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Macropus eugenii | ENSMEUG00000009912 | ortholog_one2one | 1 retrogene | |
| Rattus norvegicus | ENSRNOG00000020371 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_cjac_4056 | 79.31 | 55.70 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSCJAG00000015470 retrocopies