Parental gene: | DEF6, ENSCJAG00000015575 |
| Aliases: | None |
| Description: | differentially expressed in FDCP 6 homolog (mouse) [Source:HGNC Symbol;Acc:2760] |
| Organism: | Marmoset (Callithrix jacchus) |
| Coordinates: | 4:36228262..36395752(+) |
>ENSCJAG00000015575
ATGGCCCTGCGCAAGGAACTGCTCAAGTCCATCTGGTATGCCTTTACTGCGCTGGACGTGGAGAAGAGCGGCAAGGTCTC
CAAGTCCCAGCTCAAGGTGCTGTCCCACAACCTGTACACGGTCCTGCACATCCCCCATGACCCTGTGGCCCTGGAGGAGC
ATTTCCGAGATGATGACGATGGCCCTGTGTCCAGCCAGGGCTACATGCCCTACCTCAACAAGTACATCCTGGACAAGGTG
GAGGAAGGGGCTTTTGTTAAAGAACACTTTGATGAGCTGTGCTGGACCCTGACGGCCAAGAAGAACTATCGGGCAGATAG
CAACGGGAACAGCATGCTCTCCAATCAGGATGCCTTCCGCCTCTGGTGCCTCTTCAACTTCCTGTCTGAGGACAAGTACC
CTCTGATCATGGTTCCTGATGAGGTGGAATACCTGCTGAAAAAGGTACTCAGCAGCATGAGCTTGGAGGTGAGCTTGGGT
GAGCTGGAGGAGCTGCTGGCCCAGGAGGCCCAGGCAGCCCAGACCACCGGGGGGCTCAGTGTGTGGCAGTTCCTGGAGCT
CTTCAACTCGGGCCGCTGCCTGCGGGGCGTGGGCCGAGACACCCTCAGCATGGCCATCCACGAGGTCTACCAGGAGCTCA
TCCAAGATATCCTGAAGCAGGGCTACCTGTGGAAGCGAGGGCACCTGAGAAGGAACTGGGCCGAACGCTGGTTCCAGCTG
CAGCCCAGCCGCCTCTGCTACTTTGGGAGTGAAGAGTGCAAAGAGAAAAGGGGCATTATCCCACTGGATGCACACTGCTG
CGTGGAGGTGCTGCCAGACCGCGACGGAAAGCGCTGCATGTTCTGTGTCAAGACAGCCACCCGCACGTACGAGATGAGCG
CCTCAGACACGCGCCAGCGCCAGGAGTGGACAGCTGCCATCCAGACGGCGATCCGGCTGCAGGCCGAGGGGAAGACGTCC
CTACACAAGGACCTGAAGCAGAAACGGCGCGAGCAGCGGGAGCAGCGGGAGCGGCGCCGGGCGGCCAAGGAAGAGGAGCT
GCTGAGGCTGCAGCAGCTGCAGGAGGAGAAGGAGCGAAAGCTGCAGGAGCTGGAGCTGCTGCAGGAGGCTCAGCGGCAGG
CCGAGCGGCTGCTGCAGGAGGAGGAGGAGCGGCGCCGCAGCCAGCACCGCGAGCTGCAGCAGGCGCTCGAGGGCCAACTG
CGCGAGGCGGAGCAGGCCCGGGCCTCCATGCAGGCTGAGATGGAGCTGAAGGAGGAGGAGGCTGCCCGGCAGCGGCAGCG
CATCAAGGAGCTGGAGGAGATGCAACAGCGGTTGCAGGAGGCTCTGCAACTAGAGGTGAAAGCTCGGCGGGATGAGGAAT
CCGTGCGCCTCGCTCAGACCAGACTGCTGGAAGAGGAGGAAGAGAAGCTGAAGCAGTTGATGCAGCTGAAGGAGGAGCAG
GAGCGCTACATCGAACGGGCGCAGCAGGAGAAGGAAGAGCTGCAGCAGGAGATGGCACAGCAGAGCCGCTCCCTGCAGCA
GGCCCAGCAGCAGCTGGAGGAGGTGCGGCAGAACCGGCAGAGGGCTGACGAGGATGTGGAGGCTGCCCAGAGAAAACTGC
GCCAGGCCAGCACCAACGTGAAACACTGGAATGTCCAGATGAACCGGCTCATGCATCCAATTGAACCTGGAGATAAGCGT
CCGGTCACCAGCAGCTCCTTCACAGGATTCCAGCCCCCTCTGCTTGCCCGCCATGACTCCTCCCTAAAGCGCCTGACTCG
CTGGGGATCCCAGGGCAACAGGACCCCCTTGTCCAACAGCAATGAGCAGCAAAAGTCCCTCAATGGTGGGGGTGAGGATC
CTGCCCCGGCTTCCACCCCTCAGGAAGATAAACTGGATCCAGCACCAGAAAATTAG
ATGGCCCTGCGCAAGGAACTGCTCAAGTCCATCTGGTATGCCTTTACTGCGCTGGACGTGGAGAAGAGCGGCAAGGTCTC
CAAGTCCCAGCTCAAGGTGCTGTCCCACAACCTGTACACGGTCCTGCACATCCCCCATGACCCTGTGGCCCTGGAGGAGC
ATTTCCGAGATGATGACGATGGCCCTGTGTCCAGCCAGGGCTACATGCCCTACCTCAACAAGTACATCCTGGACAAGGTG
GAGGAAGGGGCTTTTGTTAAAGAACACTTTGATGAGCTGTGCTGGACCCTGACGGCCAAGAAGAACTATCGGGCAGATAG
CAACGGGAACAGCATGCTCTCCAATCAGGATGCCTTCCGCCTCTGGTGCCTCTTCAACTTCCTGTCTGAGGACAAGTACC
CTCTGATCATGGTTCCTGATGAGGTGGAATACCTGCTGAAAAAGGTACTCAGCAGCATGAGCTTGGAGGTGAGCTTGGGT
GAGCTGGAGGAGCTGCTGGCCCAGGAGGCCCAGGCAGCCCAGACCACCGGGGGGCTCAGTGTGTGGCAGTTCCTGGAGCT
CTTCAACTCGGGCCGCTGCCTGCGGGGCGTGGGCCGAGACACCCTCAGCATGGCCATCCACGAGGTCTACCAGGAGCTCA
TCCAAGATATCCTGAAGCAGGGCTACCTGTGGAAGCGAGGGCACCTGAGAAGGAACTGGGCCGAACGCTGGTTCCAGCTG
CAGCCCAGCCGCCTCTGCTACTTTGGGAGTGAAGAGTGCAAAGAGAAAAGGGGCATTATCCCACTGGATGCACACTGCTG
CGTGGAGGTGCTGCCAGACCGCGACGGAAAGCGCTGCATGTTCTGTGTCAAGACAGCCACCCGCACGTACGAGATGAGCG
CCTCAGACACGCGCCAGCGCCAGGAGTGGACAGCTGCCATCCAGACGGCGATCCGGCTGCAGGCCGAGGGGAAGACGTCC
CTACACAAGGACCTGAAGCAGAAACGGCGCGAGCAGCGGGAGCAGCGGGAGCGGCGCCGGGCGGCCAAGGAAGAGGAGCT
GCTGAGGCTGCAGCAGCTGCAGGAGGAGAAGGAGCGAAAGCTGCAGGAGCTGGAGCTGCTGCAGGAGGCTCAGCGGCAGG
CCGAGCGGCTGCTGCAGGAGGAGGAGGAGCGGCGCCGCAGCCAGCACCGCGAGCTGCAGCAGGCGCTCGAGGGCCAACTG
CGCGAGGCGGAGCAGGCCCGGGCCTCCATGCAGGCTGAGATGGAGCTGAAGGAGGAGGAGGCTGCCCGGCAGCGGCAGCG
CATCAAGGAGCTGGAGGAGATGCAACAGCGGTTGCAGGAGGCTCTGCAACTAGAGGTGAAAGCTCGGCGGGATGAGGAAT
CCGTGCGCCTCGCTCAGACCAGACTGCTGGAAGAGGAGGAAGAGAAGCTGAAGCAGTTGATGCAGCTGAAGGAGGAGCAG
GAGCGCTACATCGAACGGGCGCAGCAGGAGAAGGAAGAGCTGCAGCAGGAGATGGCACAGCAGAGCCGCTCCCTGCAGCA
GGCCCAGCAGCAGCTGGAGGAGGTGCGGCAGAACCGGCAGAGGGCTGACGAGGATGTGGAGGCTGCCCAGAGAAAACTGC
GCCAGGCCAGCACCAACGTGAAACACTGGAATGTCCAGATGAACCGGCTCATGCATCCAATTGAACCTGGAGATAAGCGT
CCGGTCACCAGCAGCTCCTTCACAGGATTCCAGCCCCCTCTGCTTGCCCGCCATGACTCCTCCCTAAAGCGCCTGACTCG
CTGGGGATCCCAGGGCAACAGGACCCCCTTGTCCAACAGCAATGAGCAGCAAAAGTCCCTCAATGGTGGGGGTGAGGATC
CTGCCCCGGCTTCCACCCCTCAGGAAGATAAACTGGATCCAGCACCAGAAAATTAG
| Library | Parental gene expression (RPM) |
|---|---|
| SRP051959_spleen | 135 .95 RPM |
| SRP051959_skeletal_muscle | 149 .20 RPM |
| SRP051959_lymph_node | 159 .31 RPM |
| SRP051959_lung | 106 .37 RPM |
| SRP051959_liver | 115 .71 RPM |
| SRP051959_kidney | 92 .56 RPM |
| SRP051959_heart | 84 .86 RPM |
| SRP051959_colon | 85 .44 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Callithrix jacchus | ENSCJAG00000011252 | within_species_paralog | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_cjac_10 | 98.61 | 99.54 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_cjac_313 | 92.59 | 99.54 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSCJAG00000015575 retrocopies