Parental gene: | STK38, ENSCJAG00000016045 |
| Aliases: | None |
| Description: | None |
| Organism: | Marmoset (Callithrix jacchus) |
| Coordinates: | 4:37465270..37517686(-) |
>ENSCJAG00000016045
ATGGCAATGACAGGCTCAACACCTTGCTCATCCATGAGTAACCACACAAAGGAAAGGGTGACAATGACCAAAGTGACACT
GGAGAATTTTTATAGCAACCTTATCGCTCAACATGAAGAACGAGAAATGAGACAAAAGAAGTTAGAAAAGGTGATGGAAG
AAGAAGGCCTAAAAGATGAGGAGAAACGACTCAGAAGATCAGCACATGCTCGGAAGGAAACAGAGTTTCTTCGTTTGAAG
AGAACAAGACTTGGATTGGAAGATTTTGAGTCCTTAAAAGTCATAGGTAGAGGAGCATTTGGTGAGGTACGGCTTGTTCA
GAAGAAAGATACGGGGCATGTGTATGCAATGAAAATACTCCGTAAAGCAGATATGCTTGAAAAAGAGCAGGTTGGCCACA
TTCGTGCGGAGCGTGACATTCTAGTGGAGGCAGACAGTTTGTGGGTTGTGAAAATGTTCTATAGTTTTCAGGATAAGCTA
AACCTCTACCTAATCATGGAGTTCCTGCCTGGAGGGGACATGATGACCTTGTTGATGAAAAAAGACACTCTGACAGAAGA
AGAGACTCAGTTTTATATAGCAGAAACAGTATTAGCCATAGACTCTATTCACCAACTTGGATTCATCCACAGAGACATCA
AACCAGACAACCTTCTTTTGGACAGCAAGGGCCATGTGAAACTTTCTGACTTTGGTCTTTGCACAGGACTGAAAAAAGCA
CACAGGACAGAATTTTATAGGAATCTGAACCACAGCCTCCCCAGTGATTTCACATTCCAGAACATGAATTCCAAAAGGAA
AGCAGAAACCTGGAAAAGAAATAGACGTCAGCTAGCCTTCTCCACAGTAGGCACTCCTGACTACATTGCTCCTGAGGTGT
TCATGCAGACCGGGTACAACAAGCTCTGTGATTGGTGGTCGCTTGGGGTGATCATGTATGAGATGCTCATCGCAGGCTAC
CCACCTTTCTGTTCTGAGACCCCTCAAGAGACATATAAGAAGGTGATGAACTGGAAAGAAACTTTGACTTTTCCTCCAGA
AGTTCCCATCTCTGAGAAAGCCAAGGATCTAATTTTGAGATTCTGCTGTGAATGGGAACATAGAATTGGAGCTCCTGGAG
TTGAGGAAATCAAAAGTAACTCTTTTTTTGAAGGTGTTGACTGGGAACATATCAGAGAGAGACCTGCTGCAATATCTATT
GAAATCAAAAGCATTGATGATACCTCAAACTTCGATGAGTTTCCAGAATCTGATATTCTTAAGCCAACAGTGGCCACAAG
TAATCACCCTGAGACTGACTACAAGAACAAAGACTGGGTCTTCATCAATTACACATACAAGCGCTTTGAGGGTCTGACTG
CAAGGGGGGCAATACCTTCCTACATGAAAGCAGCAAAATAG
ATGGCAATGACAGGCTCAACACCTTGCTCATCCATGAGTAACCACACAAAGGAAAGGGTGACAATGACCAAAGTGACACT
GGAGAATTTTTATAGCAACCTTATCGCTCAACATGAAGAACGAGAAATGAGACAAAAGAAGTTAGAAAAGGTGATGGAAG
AAGAAGGCCTAAAAGATGAGGAGAAACGACTCAGAAGATCAGCACATGCTCGGAAGGAAACAGAGTTTCTTCGTTTGAAG
AGAACAAGACTTGGATTGGAAGATTTTGAGTCCTTAAAAGTCATAGGTAGAGGAGCATTTGGTGAGGTACGGCTTGTTCA
GAAGAAAGATACGGGGCATGTGTATGCAATGAAAATACTCCGTAAAGCAGATATGCTTGAAAAAGAGCAGGTTGGCCACA
TTCGTGCGGAGCGTGACATTCTAGTGGAGGCAGACAGTTTGTGGGTTGTGAAAATGTTCTATAGTTTTCAGGATAAGCTA
AACCTCTACCTAATCATGGAGTTCCTGCCTGGAGGGGACATGATGACCTTGTTGATGAAAAAAGACACTCTGACAGAAGA
AGAGACTCAGTTTTATATAGCAGAAACAGTATTAGCCATAGACTCTATTCACCAACTTGGATTCATCCACAGAGACATCA
AACCAGACAACCTTCTTTTGGACAGCAAGGGCCATGTGAAACTTTCTGACTTTGGTCTTTGCACAGGACTGAAAAAAGCA
CACAGGACAGAATTTTATAGGAATCTGAACCACAGCCTCCCCAGTGATTTCACATTCCAGAACATGAATTCCAAAAGGAA
AGCAGAAACCTGGAAAAGAAATAGACGTCAGCTAGCCTTCTCCACAGTAGGCACTCCTGACTACATTGCTCCTGAGGTGT
TCATGCAGACCGGGTACAACAAGCTCTGTGATTGGTGGTCGCTTGGGGTGATCATGTATGAGATGCTCATCGCAGGCTAC
CCACCTTTCTGTTCTGAGACCCCTCAAGAGACATATAAGAAGGTGATGAACTGGAAAGAAACTTTGACTTTTCCTCCAGA
AGTTCCCATCTCTGAGAAAGCCAAGGATCTAATTTTGAGATTCTGCTGTGAATGGGAACATAGAATTGGAGCTCCTGGAG
TTGAGGAAATCAAAAGTAACTCTTTTTTTGAAGGTGTTGACTGGGAACATATCAGAGAGAGACCTGCTGCAATATCTATT
GAAATCAAAAGCATTGATGATACCTCAAACTTCGATGAGTTTCCAGAATCTGATATTCTTAAGCCAACAGTGGCCACAAG
TAATCACCCTGAGACTGACTACAAGAACAAAGACTGGGTCTTCATCAATTACACATACAAGCGCTTTGAGGGTCTGACTG
CAAGGGGGGCAATACCTTCCTACATGAAAGCAGCAAAATAG
| Library | Parental gene expression (RPM) |
|---|---|
| SRP051959_spleen | 28 .24 RPM |
| SRP051959_skeletal_muscle | 11 .55 RPM |
| SRP051959_lymph_node | 42 .94 RPM |
| SRP051959_lung | 34 .26 RPM |
| SRP051959_liver | 9 .34 RPM |
| SRP051959_kidney | 18 .50 RPM |
| SRP051959_heart | 15 .03 RPM |
| SRP051959_colon | 30 .02 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Bos taurus | ENSBTAG00000011126 | ortholog_one2one | 1 retrogene | |
| Tarsius syrichta | ENSTSYG00000012409 | ortholog_one2one | 2 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_cjac_2806 | 94.22 | 100.00 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_cjac_2824 | 93.15 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSCJAG00000016045 retrocopies