Parental gene: | PCDHB2, ENSCJAG00000016152 |
| Aliases: | None |
| Description: | protocadherin beta 2 [Source:HGNC Symbol;Acc:8687] |
| Organism: | Marmoset (Callithrix jacchus) |
| Coordinates: | 2:37978347..38164153(+) |
>ENSCJAG00000016152
ATGGAGGCTGGAGAGGAGAAGGAGCGCGTTCCGAAACAAAGGCAAGTCGTGATATTCTTTGTTTTGCTGGGCATAGCTCA
GGCTAGTTCCCAGCCTAGGCACTATTCAGTGGCTGAGGAAACGGAGAGTGGCTCGTTTGTGGCCAATTTGTTAAAAGACC
TGGGGCTGGAGGTAAGAGAACTTGCTGTGAGGGGGGCCAGGGTCGTTTCCAAAGGAAAAAAAATGCATTTGCAGTTCGAT
AGGCAGACCGGGGATTTATTGCTAAATGAGAAATTGGACCGGGAGGAGCTGTGCGGCCCCACAGAGCCGTGTGTCCTACC
TTTCCAGGTGTTACTAGAAAATCCCTTGCAGTTTTTTCAGGCGGAGCTACGAATTAGGGACATAAATGATCATCCCCCAG
TTTTCCTAGACAAAGAAATACTTTTGAAAATTTCGGAGAGTATCACTCCTGGAACTACTTTTTTATTAGAACGTGCCCAG
GACTTGGATGTAGGAACCAACAGTCTCCAAAATTACACAATCAGTCCCAATTTCCACTTCCACCTTAATTTACAAGACAA
TCCCGATGGCACAATATTACCACAGCTGGTGCTGGACAGAGCCCTGGATCGCGAGGAGCAGCCCGAGATCAGGTTAACCC
TCACAGCGCTGGATGGCGGGACTCCACCCAAGTCCGGCACGGCCCTGGTACGCATTGAAGTTGTGGACATCAATGACAAC
ATCCCAGAGTTTGCAAAGCTGCTCTATGAGGTGCAGGTCCCAGAGGACAGCCCTGTTGGATCCCAGGTTGCCACCGTCTC
TGCCAGGGATTTAGACATTGGAACTAATGGAGAAATATCTTATGCATTTTCCCAAGCCTCTGAAGACATTCGCAAAACGT
TTCGATTAAGTGCCAAATCGGGAGAACTCCTTTTAAGACAGAAACTGGATTTCGAATCCATCCAGACGTACACAGTAAAT
ATTCAGGCGACAGATGGCGGAGGCCTATCTGGAAAGTCTACAGTTGTAGTCCAGGTGGTTGATGTCAATGACAACCCACC
AGAACTGACCTTGTCGTCAGTAAACAGCCCTGTCCCCGAGAACTCGGCAGAGACTGTACTGGCTGTTTTCAGAATTCGAG
ATAGAGATTCTGGAGACAATGGCAAGATGATTTGCTCTATTCCAGATAATCTACCGTTTATTCTAAAACCGACTTTGAAG
AATTTTTACACCCTGGTAACAGAGAGACCACTGGACAGAGAGACCAGAGCCGAGTACAACATCATTATCATCGTCACAGA
CTTGGGGACACCCAGGCTTAAAACCGAGCACAGCATAACCGTGCGGGTCTCCGACGTCAATGACAACGCCCCCGCCTTCA
CTCAAACCTCCTACACCCTCTTCGTCCGCGAGAACAACAGCCCGGCCCTGCACATCGGCACCGTCAGCGCCACAGACAGA
GACTCAGGCACCAACGCCCAGGTCACCTACTCGCTGCTGCAGCCCCAGGACCCGCACCTGCCCCTCGCCTCCCTGGTCTC
CATCAACGCGGACAACGGACACCTGTTCGCCCTCCGGTCGCTGGACTACGAGGCCCTGCAGGCGTTCGAGTTCCGCGTGG
GCGCCACAGACCGCGGCTCCCCGGCGCTGAGCAGCGAGGCGCTGGTGCGCGTGCTGGTGCTGGACGCCAACGACAACTCG
CCCTTCGTGCTGTACCCGCTGCAGAACGGCTCCGCGCCCTGCACCGAGCTGGTGCCCCGGGTGGCCGAGCCGGGCTACCT
GGTGACCAAGGTGGTGGCGGTGGACGGCGACTCGGGCCAGAACGCCTGGCTGTCGTTCCAGCTGCTCAAGGCCACGGAGC
CCGGGCTGTTCGGCGTGTGGGCGCACAATGGCGAGGTGCGCACCGCCAGGCTGCTGAGCGAGCGCGACGCGGCCAAGCAC
AGGCTGCTGGTGCTGGTCAAGGACAATGGCGAGCCTCCGCGCTCGGCCACCGCCACGCTGCACGTGCTCCTGGTGGACGG
CTTCTCCCAGCCCTACCTGCCGCTCCCGGAGGCGGCCCCGGCCCAGGCCCAGGCTGACTCGCTCACCGTCTACCTGGTGG
TGGCGTTGGCCTCGGTGTCGTCGCTCTTCCTGTTCTCGGTGCTCCTGTTCGTGGCGGTGCGGCTGTGCAGGAGGAGCAGG
GCGGCCTCTGTGGGTGGCTGCTCGGTGACCGAGGGTCCCTTTCCAGGGCATCTGGTGGACGTGAGCGGCACCGGGACCCT
GTCCCAGAGCTACCAGTACGAGGTGTGTCTGACGGGAGGCTCCGCGACAAATGAGTTCAAGTTCCTGAAACCAATTATCC
CCAACTTCCTACCCCAGAACACAGGTAGGGAAGTCGAAGAAAATCCCCCATTTCAGAATAATTTGGGTTTCTGA
ATGGAGGCTGGAGAGGAGAAGGAGCGCGTTCCGAAACAAAGGCAAGTCGTGATATTCTTTGTTTTGCTGGGCATAGCTCA
GGCTAGTTCCCAGCCTAGGCACTATTCAGTGGCTGAGGAAACGGAGAGTGGCTCGTTTGTGGCCAATTTGTTAAAAGACC
TGGGGCTGGAGGTAAGAGAACTTGCTGTGAGGGGGGCCAGGGTCGTTTCCAAAGGAAAAAAAATGCATTTGCAGTTCGAT
AGGCAGACCGGGGATTTATTGCTAAATGAGAAATTGGACCGGGAGGAGCTGTGCGGCCCCACAGAGCCGTGTGTCCTACC
TTTCCAGGTGTTACTAGAAAATCCCTTGCAGTTTTTTCAGGCGGAGCTACGAATTAGGGACATAAATGATCATCCCCCAG
TTTTCCTAGACAAAGAAATACTTTTGAAAATTTCGGAGAGTATCACTCCTGGAACTACTTTTTTATTAGAACGTGCCCAG
GACTTGGATGTAGGAACCAACAGTCTCCAAAATTACACAATCAGTCCCAATTTCCACTTCCACCTTAATTTACAAGACAA
TCCCGATGGCACAATATTACCACAGCTGGTGCTGGACAGAGCCCTGGATCGCGAGGAGCAGCCCGAGATCAGGTTAACCC
TCACAGCGCTGGATGGCGGGACTCCACCCAAGTCCGGCACGGCCCTGGTACGCATTGAAGTTGTGGACATCAATGACAAC
ATCCCAGAGTTTGCAAAGCTGCTCTATGAGGTGCAGGTCCCAGAGGACAGCCCTGTTGGATCCCAGGTTGCCACCGTCTC
TGCCAGGGATTTAGACATTGGAACTAATGGAGAAATATCTTATGCATTTTCCCAAGCCTCTGAAGACATTCGCAAAACGT
TTCGATTAAGTGCCAAATCGGGAGAACTCCTTTTAAGACAGAAACTGGATTTCGAATCCATCCAGACGTACACAGTAAAT
ATTCAGGCGACAGATGGCGGAGGCCTATCTGGAAAGTCTACAGTTGTAGTCCAGGTGGTTGATGTCAATGACAACCCACC
AGAACTGACCTTGTCGTCAGTAAACAGCCCTGTCCCCGAGAACTCGGCAGAGACTGTACTGGCTGTTTTCAGAATTCGAG
ATAGAGATTCTGGAGACAATGGCAAGATGATTTGCTCTATTCCAGATAATCTACCGTTTATTCTAAAACCGACTTTGAAG
AATTTTTACACCCTGGTAACAGAGAGACCACTGGACAGAGAGACCAGAGCCGAGTACAACATCATTATCATCGTCACAGA
CTTGGGGACACCCAGGCTTAAAACCGAGCACAGCATAACCGTGCGGGTCTCCGACGTCAATGACAACGCCCCCGCCTTCA
CTCAAACCTCCTACACCCTCTTCGTCCGCGAGAACAACAGCCCGGCCCTGCACATCGGCACCGTCAGCGCCACAGACAGA
GACTCAGGCACCAACGCCCAGGTCACCTACTCGCTGCTGCAGCCCCAGGACCCGCACCTGCCCCTCGCCTCCCTGGTCTC
CATCAACGCGGACAACGGACACCTGTTCGCCCTCCGGTCGCTGGACTACGAGGCCCTGCAGGCGTTCGAGTTCCGCGTGG
GCGCCACAGACCGCGGCTCCCCGGCGCTGAGCAGCGAGGCGCTGGTGCGCGTGCTGGTGCTGGACGCCAACGACAACTCG
CCCTTCGTGCTGTACCCGCTGCAGAACGGCTCCGCGCCCTGCACCGAGCTGGTGCCCCGGGTGGCCGAGCCGGGCTACCT
GGTGACCAAGGTGGTGGCGGTGGACGGCGACTCGGGCCAGAACGCCTGGCTGTCGTTCCAGCTGCTCAAGGCCACGGAGC
CCGGGCTGTTCGGCGTGTGGGCGCACAATGGCGAGGTGCGCACCGCCAGGCTGCTGAGCGAGCGCGACGCGGCCAAGCAC
AGGCTGCTGGTGCTGGTCAAGGACAATGGCGAGCCTCCGCGCTCGGCCACCGCCACGCTGCACGTGCTCCTGGTGGACGG
CTTCTCCCAGCCCTACCTGCCGCTCCCGGAGGCGGCCCCGGCCCAGGCCCAGGCTGACTCGCTCACCGTCTACCTGGTGG
TGGCGTTGGCCTCGGTGTCGTCGCTCTTCCTGTTCTCGGTGCTCCTGTTCGTGGCGGTGCGGCTGTGCAGGAGGAGCAGG
GCGGCCTCTGTGGGTGGCTGCTCGGTGACCGAGGGTCCCTTTCCAGGGCATCTGGTGGACGTGAGCGGCACCGGGACCCT
GTCCCAGAGCTACCAGTACGAGGTGTGTCTGACGGGAGGCTCCGCGACAAATGAGTTCAAGTTCCTGAAACCAATTATCC
CCAACTTCCTACCCCAGAACACAGGTAGGGAAGTCGAAGAAAATCCCCCATTTCAGAATAATTTGGGTTTCTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP051959_spleen | 1 .97 RPM |
| SRP051959_skeletal_muscle | 1 .18 RPM |
| SRP051959_lymph_node | 0 .68 RPM |
| SRP051959_lung | 1 .63 RPM |
| SRP051959_liver | 0 .37 RPM |
| SRP051959_kidney | 1 .31 RPM |
| SRP051959_heart | 3 .14 RPM |
| SRP051959_colon | 1 .95 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Oryctolagus cuniculus | ENSOCUG00000010930 | ortholog_one2many | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_cjac_1774 | 79.26 | 98.62 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSCJAG00000016152 retrocopies