Parental gene:

ENSCJAG00000016193

Aliases:None
Description:None
Organism:Marmoset (Callithrix jacchus)
Coordinates:8:74746724..74786815(-)


>ENSCJAG00000016193
ATGAATGCTGCGGCAGAAGCCGAGTTCAACATCCTCCTGGCCACCGACTCCTACAAGGTTACTCATTATAAACAATATCC
ACCCAACACAAGTAAAGTTTATTCCTACTTTGAATGCCGTGAAAAGAAGACAGAAAACTCCAAAGTAAGGAAGGTGAAAT
ACGAGGAAACAGTATTTTATGGGTTGCAGTACATTCTTAATAAGTACTTAAAAGGTAAAGTAATAACCAAAGAGAAAATC
CAAGAAGCCAAAGAGGTCTACAAAGAACATTTCCAAGATGATGTCTTTAATGAAAAGGGATGGAACTACATTCTTGAGAA
ATATGATGGGCATCTTCCAATAGAAGTAAAAGCTGTTCCTGAGGGTTCTGTCATTCCCAGAGGAAATGTTCTCTTCACAG
TGGAAAACACAGATCCAGAGTGTTACTGGCTTACAAATTGGATTGAGACTATTCTTGTTCAGTCCTGGTATCCAATCACA
GTGGCCACAAATTCTAGAGAGCAGAAGAAAATATTGGCCAAATATTTGTTAGAAACTTCTGGTAACTTAGATGGTCTGGA
ATACAAGTTACATGATTTTGGCTACAGAGGAGTCTCTTCCCAAGAGACTGCTGGCATAGGAGCATCTGCTCATTTGGTTA
ACTTCAAAGGAACAGATACAGTAGCAGGAATTGCTCTCATAAAAAAATATTATGGAACAAAAGATCCTGTTCCAGGCTAT
TCTGTTCCAGCAGCAGAACACAGTACCATAACAGCCTGGGGGAAAGACCATGAAAAAGATGCTTTTGAACATATAGTAAC
ACAGTTTTCATCAGTGCCTGTATCTGTGGTCAGCGATAGCTATGACATTTATAATGCGTGTGAGAAAATATGGGGTGAAG
ATCTAAGACATTTAATAGTATCCAGAAGTACAGAGGCACCACTAATAATCAGACCTGATTCTGGAAACCCTCTTGACACT
GTGTTAAAGGTTTTGGAGATTTTAGGTAAGAAGTTTCCTGTTACTGAGAACTCAAAGGGCTACAAGTTGCTGCCTCCTTA
TCTCAGAGTGATTCAAGGGGATGGAGTAGATATTAATACCTTACAAGAGATTGTAGAAGGCATGAAACTAAAAAAGTGGA
GTATTGAAAATGTTTCCTTCGGTTCTGGTGGAGCTTTGCTACAGAAGTTAACAAGAGATCTCTTGAATTGTTCCTTCAAG
TGTAGTTATGTTGTAACCAATGGCCTTGGGATTAACGTCTTCAAGGACCCAGTTGCTGATCCCAACAAAAGGTCCAAAAA
GGGCCGACTATCTTTACATAGGACACCAGCAGGAAATTTTGTTACACTGGAGGAAGGAAAAGGAGACCTTGAGGAATATG
GTCATGATCTTCTCCATACTGTCTTCAAGAATGGCAAGGTGACAAAAAGCTATTCATTTGATGAAGTAAGAAAAAATGCA
CAGCTGAATATTGAACTGGAAGCAGCACCTCATTAG

Library Parental gene expression (RPM)
SRP051959_spleen 72 .27 RPM
SRP051959_skeletal_muscle 108 .16 RPM
SRP051959_lymph_node 43 .88 RPM
SRP051959_lung 65 .69 RPM
SRP051959_liver 234 .78 RPM
SRP051959_kidney 65 .72 RPM
SRP051959_heart 46 .48 RPM
SRP051959_colon 44 .06 RPM



Species Parental gene accession Homology type Retrogenes number
Cavia porcellus ENSCPOG00000009226 ortholog_one2many 1 retrogene
Homo sapiens ENSG00000105835 ortholog_one2many 1 retrogene
Oryctolagus cuniculus ENSOCUG00000013417 ortholog_one2one 1 retrogene
Pongo abelii ENSPPYG00000018270 ortholog_one2one 2 retrogenes
Pan troglodytes ENSPTRG00000019571 ortholog_one2many 1 retrogene
Takifugu rubripes ENSTRUG00000016695 ortholog_one2one 1 retrogene

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cjac_1281 92.56 93.08
Please wait, loading
Please wait, loading
Please wait, loading
2. retro_cjac_3877 94.06 65.17
Please wait, loading
Please wait, loading
Please wait, loading

Download FASTA sequences of all ENSCJAG00000016193 retrocopies