Parental gene: | ENSCJAG00000016303 |
| Aliases: | None |
| Description: | None |
| Organism: | Marmoset (Callithrix jacchus) |
| Coordinates: | 2:9236336..9238024(+) |
>ENSCJAG00000016303
ATGACCGAGCGCCGCGTCCCCTTCTCGCTCCTGCGGAGCCCCAGCTGGGACCCCTTCCGCGACTGGTACCCGCACAACCG
TCTCTTCGACCAGGCATTCGGGATGCCCCGGCTGCCCGAGGAGTGGTCGCAGTGGTTCGGCACCAGCAGCTGGCCGGGCT
ACGTGCGCCCCCTGCCCCCCGCCGCGGTCGAGGGCCCCGCAGTGGCCGCGCCCGCCTACAGCCGCGCGCTCAGCCGGCAG
CTCAGCAGCGGGGTCTCGGAGATCCGGCACACGGCGGACCGCTGGCGCGTGTCCCTGGACGTCAACCACTTCGCCCCCGA
GGAGCTGACGGTCAAGACCAAGGATGGCGTGGTGGAGATCACCGGCAAGCACGAGGAGCGGCAGGATGAGCACGGATTCA
TCTCCCGCTGCTTCACCCGGAAATACTCGCTGCCCCCTGGTGTGGACCCCACCCAGGTCTCCTCCTCCCTGTCCCCTGAG
GGCACACTGACCGTTGAGGCCCCCATGCCCAAGCCAGCCACACAGTCCAACGAGATCACCATCCCTGTCACCTTCGAGTC
GCGGGCCCAGCTTGGGGGCCCAGAAGCTGCGAAATCTGACCAGTCTGCAGCCAAGTAA
ATGACCGAGCGCCGCGTCCCCTTCTCGCTCCTGCGGAGCCCCAGCTGGGACCCCTTCCGCGACTGGTACCCGCACAACCG
TCTCTTCGACCAGGCATTCGGGATGCCCCGGCTGCCCGAGGAGTGGTCGCAGTGGTTCGGCACCAGCAGCTGGCCGGGCT
ACGTGCGCCCCCTGCCCCCCGCCGCGGTCGAGGGCCCCGCAGTGGCCGCGCCCGCCTACAGCCGCGCGCTCAGCCGGCAG
CTCAGCAGCGGGGTCTCGGAGATCCGGCACACGGCGGACCGCTGGCGCGTGTCCCTGGACGTCAACCACTTCGCCCCCGA
GGAGCTGACGGTCAAGACCAAGGATGGCGTGGTGGAGATCACCGGCAAGCACGAGGAGCGGCAGGATGAGCACGGATTCA
TCTCCCGCTGCTTCACCCGGAAATACTCGCTGCCCCCTGGTGTGGACCCCACCCAGGTCTCCTCCTCCCTGTCCCCTGAG
GGCACACTGACCGTTGAGGCCCCCATGCCCAAGCCAGCCACACAGTCCAACGAGATCACCATCCCTGTCACCTTCGAGTC
GCGGGCCCAGCTTGGGGGCCCAGAAGCTGCGAAATCTGACCAGTCTGCAGCCAAGTAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP051959_spleen | 16 .03 RPM |
| SRP051959_skeletal_muscle | 117 .86 RPM |
| SRP051959_lymph_node | 10 .48 RPM |
| SRP051959_lung | 11 .19 RPM |
| SRP051959_liver | 10 .61 RPM |
| SRP051959_kidney | 13 .11 RPM |
| SRP051959_heart | 33 .62 RPM |
| SRP051959_colon | 12 .34 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Homo sapiens | ENSG00000106211 | ortholog_one2many | 1 retrogene | |
| Gorilla gorilla | ENSGGOG00000002700 | ortholog_one2many | 1 retrogene | |
| Mus musculus | ENSMUSG00000004951 | ortholog_one2many | 1 retrogene | |
| Pongo abelii | ENSPPYG00000029733 | ortholog_one2many | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_cjac_396 | 89.71 | 99.02 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_cjac_412 | 90.73 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_cjac_591 | 93.66 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_cjac_1914 | 80.00 | 87.65 | Please wait, loading | Please wait, loading | Please wait, loading |
| 5. | retro_cjac_2499 | 89.19 | 54.15 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSCJAG00000016303 retrocopies