Parental gene: | TSPAN15, ENSCJAG00000016486 |
| Aliases: | None |
| Description: | tetraspanin 15 [Source:HGNC Symbol;Acc:23298] |
| Organism: | Marmoset (Callithrix jacchus) |
| Coordinates: | 12:54637308..54695407(-) |
>ENSCJAG00000016486
ATGCCGCGCGGGGACTCGGAGCAGGTGCGCTACTGTGCGCACTTCTCTTACCTCTGGCTCAAGTTCTCACTTATCATTTA
CTCCACCGTGTTCTGGTTGATCGGGGCCCTGGTCCTGTCCGTGGGGATCTATGCAGAGGTTGAGCGGCAGAAATATAAAA
CCCTTGAAAGTGCCTTCCTGGCTCCGGCCATCATCCTCATCCTCCTGGGTGTCGTCATGTTCATGGTCTCCTTCATTGGT
GTGCTGGCATCCCTCCGTGACAACCTGTTCCTTCTCCAAGCATTCATGTACATCCTTGGGATCTGCCTCATCATGGAGCT
CATTGGTGGCGTGGTGGCCTTGATCTTCCGGAACCAGACCATTGACTTCCTGAATGACAACATTCGAAGAGGAATTGAGA
ACTACTATGACGATCTGGACTTCAAAAACATCATGGACTTTGTTCAGAAAAAGTTCAAGTGCTGTGGCGGGGAGGACTAC
CGAGACTGGAGCAAGAACCAGTACCACGACTGCAGCGCTCCTGGACCCCTGGCCTGCGGGGTGCCCTACACCTGCTGCAT
CCGGAACACGACAGAAGTTGTCAACACCATGTGTGGCTACAAAACTATCGACAAGGAGCGCCTCAGTGTGCAGGACGTCA
TCTACGTGCGGGGCTGCACCAATGCCGTGCTCATCTGGTTCATGGACAACTACACCATCATGGCGGGCATCCTCCTGGGC
ATCCTGCTTCCCCAGTTCCTGGGGGTGCTGCTGACGCTGCTGTACATCACCCGGGTGGAGGACATCATCAGGGAGCACTC
CGTCACAGATGGGCTCCTGGGGCCAGGTGCCAAGTCTGGTGTGGAGGTGGAGGGCACGGGATGCTGCTTGTGCTACCCCA
ATTAG
ATGCCGCGCGGGGACTCGGAGCAGGTGCGCTACTGTGCGCACTTCTCTTACCTCTGGCTCAAGTTCTCACTTATCATTTA
CTCCACCGTGTTCTGGTTGATCGGGGCCCTGGTCCTGTCCGTGGGGATCTATGCAGAGGTTGAGCGGCAGAAATATAAAA
CCCTTGAAAGTGCCTTCCTGGCTCCGGCCATCATCCTCATCCTCCTGGGTGTCGTCATGTTCATGGTCTCCTTCATTGGT
GTGCTGGCATCCCTCCGTGACAACCTGTTCCTTCTCCAAGCATTCATGTACATCCTTGGGATCTGCCTCATCATGGAGCT
CATTGGTGGCGTGGTGGCCTTGATCTTCCGGAACCAGACCATTGACTTCCTGAATGACAACATTCGAAGAGGAATTGAGA
ACTACTATGACGATCTGGACTTCAAAAACATCATGGACTTTGTTCAGAAAAAGTTCAAGTGCTGTGGCGGGGAGGACTAC
CGAGACTGGAGCAAGAACCAGTACCACGACTGCAGCGCTCCTGGACCCCTGGCCTGCGGGGTGCCCTACACCTGCTGCAT
CCGGAACACGACAGAAGTTGTCAACACCATGTGTGGCTACAAAACTATCGACAAGGAGCGCCTCAGTGTGCAGGACGTCA
TCTACGTGCGGGGCTGCACCAATGCCGTGCTCATCTGGTTCATGGACAACTACACCATCATGGCGGGCATCCTCCTGGGC
ATCCTGCTTCCCCAGTTCCTGGGGGTGCTGCTGACGCTGCTGTACATCACCCGGGTGGAGGACATCATCAGGGAGCACTC
CGTCACAGATGGGCTCCTGGGGCCAGGTGCCAAGTCTGGTGTGGAGGTGGAGGGCACGGGATGCTGCTTGTGCTACCCCA
ATTAG
| Library | Parental gene expression (RPM) |
|---|---|
| SRP051959_spleen | 5 .92 RPM |
| SRP051959_skeletal_muscle | 2 .75 RPM |
| SRP051959_lymph_node | 2 .81 RPM |
| SRP051959_lung | 7 .58 RPM |
| SRP051959_liver | 0 .80 RPM |
| SRP051959_kidney | 1 .06 RPM |
| SRP051959_heart | 3 .12 RPM |
| SRP051959_colon | 44 .46 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Callithrix jacchus | ENSCJAG00000007278 | within_species_paralog | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_cjac_4116 | 96.83 | 64.29 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSCJAG00000016486 retrocopies