Parental gene:

APEX2, ENSCJAG00000016584

Aliases:None
Description:None
Organism:Marmoset (Callithrix jacchus)
Coordinates:X:52838768..52848953(+)


>ENSCJAG00000016584
ATGTTGCGTGTGGTGAGCTGGAACATCAATGGGATTCGGAGACCCCTGCAAGGGATGGCAAATCAGGAACCCAACAACTG
TGCCGCTGTGGCCGTGGGGCGCATTTTGGACGAGCTGGATGCCGATATCGTCTGTCTCCAGGAGACCAAAGTGACCAGGG
ATGCACTGACAGAACCCCTGGCTATCGTTGAGGGTTATAACTCCTATTTCAGCTTCAGCCGCAACCGTAGTGGCTATTCT
GGTGTAGCCACCTTCTGTAAGGACAGCGCTACCCCAGTGGCTGCTGAAGAAGGCCTGAGTGGCCTGTTTGCCACCCAGAA
TGGGGATGTGGGTTGCTATGGAAACATGGATGAGTTTACCCAAGAGGAACTCCGGGCTCTGGATAGTGAGGGCCGGGCCC
TCCTCACACAGCACAAGATCCGCACATGGGAAGGAAAGGAGAGGACCTTGACCCTAATCAACGTGTACTGCCCCCACGCA
GACCCTGGGAGGCCTGAGCGTCTGGTCTTTAAGATGCGCTTCTATCGCTTGCTGCAAATCCGAGCAGAAGCCCTCCTGGC
GGCAGGCAGCCATGTGATCATTCTGGGTGACCTGAATACAGCCCACCGCCCCATTGACCACTGGGATTCAGTCAACCTGG
AATGTTTTGAAGAAGACCCAGGGCGCAAGTGGATGGACGGCTTGCTCAGTAACTTGGGGTGCCAGTCTGCCTCTCATGTA
GGGCCCTTCATCGATAGCTACCGCTGCTTCCAACCAAAGCAGGAGGGGGCCTTCACCTGCTGGTCAGCAGTCACGGGCGC
CCGCCATCTCAACTATGGCTCTCGGATTGACTATGTGCTGGGGGACAGGACCCTGGTCATAGACACCTTTCAGGCCTCTT
TCCTGCTGCCTGAGGTAATGGGCTCGGACCACTGCCCTGTGGGTGCAGTCTTGAGCGTGTCCTCTGTGCCTGCAAAACAG
TGCCCATCTCTGTGTACCCGCTTCCTTCCTGAGTTTGCAGGCACCCAGCTCAAGATCCTTCGCTTCCTAGTTCCTCTCAA
ACAAGGGCCTGTGTTGGAGCAGTCGGCACCGCAGCATAACAGTCAAACTCGGGTACAGACATGCCAAAACAAAGCCCGCG
TGCGCTCAACCAGGCTTCGGCCCAGTCAGCTTGGCTCTAGCAGAGGCCAGAAAAACCTGAAGAGCTACTTTCAGCCCTCC
CCTAGCTGTCCCCAAGCCTCTCCTGACATAGAGCTGCCTAGCCTGCCACTGATGAGCGCTCTCATGACCCCGAAGACTTC
AGAAGAGGAGGCAGTGGCCAAAGTGGTGAAGGGGCAGGCCAAGGCTTCAGAAGCCAAAGATGAGAAGGAAGTACGGACCT
CATTCTGGAAGTCTTTGTTGGCGGGGCCCTTGCACATACCCCTCTGTGGGGGCCACAGGGAGCCATGTGTGATGCGTACT
GTGAAGAAGCCAGGACCCAACCTGGGCCGCCACTTCTACATGTGTGCCAGGCCCCGGGGTCCTCCTAATGACCCCTCCTC
CCGCTGCAACTTCTTCCTCTGGAGCAGGCCCAGCTGA

Library Parental gene expression (RPM)
SRP051959_spleen 2 .67 RPM
SRP051959_skeletal_muscle 0 .81 RPM
SRP051959_lymph_node 2 .88 RPM
SRP051959_lung 1 .61 RPM
SRP051959_liver 0 .80 RPM
SRP051959_kidney 1 .02 RPM
SRP051959_heart 0 .96 RPM
SRP051959_colon 1 .35 RPM



Species Parental gene accession Homology type Retrogenes number
Myotis lucifugus ENSMLUG00000016298 ortholog_one2many 1 retrogene
retro_mluc_287,
Mus musculus ENSMUSG00000025269 ortholog_one2one 1 retrogene
retro_mmus_2564,
Rattus norvegicus ENSRNOG00000000166 ortholog_one2one 1 retrogene
retro_rnor_1061,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cjac_2967 90.48 100.00
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Download FASTA sequences of all ENSCJAG00000016584 retrocopies