Parental gene: | MKRN2, ENSCJAG00000016733 |
| Aliases: | None |
| Description: | makorin ring finger protein 2 [Source:HGNC Symbol;Acc:7113] |
| Organism: | Marmoset (Callithrix jacchus) |
| Coordinates: | 15:64525231..64538075(+) |
>ENSCJAG00000016733
TTGTATGCCTGTGCTTGTCTCTTCAGGTACTTTATGCATGGTGTGTGTCGGGAAGGAAGCCAGTGCTTATTCTCACATGA
CTTGGCAAACAGCAAGCCGTCCACCATCTGCAAGTACTACCAGAAAGGCTACTGTGCCTATGGAACTCGGTGCAGATATG
ACCACACAAGGCCCTCTGCTGCAGCTGGAGGTGCTGTGGGCACCATGGCCCACAATGTACCCTCTCCGACTTTTCACAGT
CCTCACCCTCCTTCTGAGGTCACTGCATCCATTGTGAAAACTAACTCACATGAACCTGGGAAGCGTGAAAAGAGAACATT
GGTTCTCAGAGACCGAAATCTCTCTGGCATGGCTGAAGGAAAGACTAACCCGAGCATGGTGAGTAATCTAGGCAGCTGCA
GTGACTCCCAGCCCAGCCCCGAGATGAAGCCGACTTCCTACCTAGATGCCATTAGGAGTGGCCTTGATGACCTGGAGGCC
AGCAGCTCCTACAACAATAAGCAGCAGCTGTGCCCCTATGCAGCTGCTGGGGAGTGCCGATTTGGGGATGCCTGTGTCTA
CCTGCACGGGGAGGTCTGTGAAATCTGTAGGCTGCGAGTCTTGCACCCCTTCGACCCAGAGCAGAGGAAGGCTCACGAAA
AGATCTGCATGTTGACATTCGAACATGAGATGGAGAAGGCCTTTGCCTTCCAAGCAAGCCAGGACAAAGTGTGCAGTATC
TGCATGGAAGTGATCCTGGAGAAGGCCTCTGCTTCTGAGAGGAGATTTGGGATTCTCTCCAATTGCAATCACACGTACTG
CTTGTCCTGCATCCGACAGTGGCGGTGTGCCAAACAATTTGAAAACCAAATCATTAAGTCTTGTCCAGAATGCCGTGTGA
TATCAGAGTTTGTAATTCCAAGTGTGTATTGGGAAGATCAGAATAAAAAGAATGAGTTGATTGAAGCTTTCAAACAGGGG
ATGGGGAAAAAAGCCTGTAAATACTTTGAGCAAGGCAAGGGGACCTGCCCATTTGGAAGCAAATGCCTTTATCGACATGC
TTACCCTGATGGGCGGCTAGCAGAGCCTGAGAAACCTCGGAAACAGCTCAGTTCTCAAGGCACTGTGAGGTTCTTTAATT
CAGTGCGGCTCTGGGATTTCATTGAGAACCGAGAAAGCCAGCATGTCCCCAACAATGAAGATGTCGACATGACAGAGCTT
GGGGACCTCTTCATGCACCTTTCTGGAGTGGAGTCATCAGAACCCTAA
TTGTATGCCTGTGCTTGTCTCTTCAGGTACTTTATGCATGGTGTGTGTCGGGAAGGAAGCCAGTGCTTATTCTCACATGA
CTTGGCAAACAGCAAGCCGTCCACCATCTGCAAGTACTACCAGAAAGGCTACTGTGCCTATGGAACTCGGTGCAGATATG
ACCACACAAGGCCCTCTGCTGCAGCTGGAGGTGCTGTGGGCACCATGGCCCACAATGTACCCTCTCCGACTTTTCACAGT
CCTCACCCTCCTTCTGAGGTCACTGCATCCATTGTGAAAACTAACTCACATGAACCTGGGAAGCGTGAAAAGAGAACATT
GGTTCTCAGAGACCGAAATCTCTCTGGCATGGCTGAAGGAAAGACTAACCCGAGCATGGTGAGTAATCTAGGCAGCTGCA
GTGACTCCCAGCCCAGCCCCGAGATGAAGCCGACTTCCTACCTAGATGCCATTAGGAGTGGCCTTGATGACCTGGAGGCC
AGCAGCTCCTACAACAATAAGCAGCAGCTGTGCCCCTATGCAGCTGCTGGGGAGTGCCGATTTGGGGATGCCTGTGTCTA
CCTGCACGGGGAGGTCTGTGAAATCTGTAGGCTGCGAGTCTTGCACCCCTTCGACCCAGAGCAGAGGAAGGCTCACGAAA
AGATCTGCATGTTGACATTCGAACATGAGATGGAGAAGGCCTTTGCCTTCCAAGCAAGCCAGGACAAAGTGTGCAGTATC
TGCATGGAAGTGATCCTGGAGAAGGCCTCTGCTTCTGAGAGGAGATTTGGGATTCTCTCCAATTGCAATCACACGTACTG
CTTGTCCTGCATCCGACAGTGGCGGTGTGCCAAACAATTTGAAAACCAAATCATTAAGTCTTGTCCAGAATGCCGTGTGA
TATCAGAGTTTGTAATTCCAAGTGTGTATTGGGAAGATCAGAATAAAAAGAATGAGTTGATTGAAGCTTTCAAACAGGGG
ATGGGGAAAAAAGCCTGTAAATACTTTGAGCAAGGCAAGGGGACCTGCCCATTTGGAAGCAAATGCCTTTATCGACATGC
TTACCCTGATGGGCGGCTAGCAGAGCCTGAGAAACCTCGGAAACAGCTCAGTTCTCAAGGCACTGTGAGGTTCTTTAATT
CAGTGCGGCTCTGGGATTTCATTGAGAACCGAGAAAGCCAGCATGTCCCCAACAATGAAGATGTCGACATGACAGAGCTT
GGGGACCTCTTCATGCACCTTTCTGGAGTGGAGTCATCAGAACCCTAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP051959_spleen | 10 .44 RPM |
| SRP051959_skeletal_muscle | 23 .63 RPM |
| SRP051959_lymph_node | 10 .02 RPM |
| SRP051959_lung | 9 .65 RPM |
| SRP051959_liver | 6 .82 RPM |
| SRP051959_kidney | 8 .52 RPM |
| SRP051959_heart | 17 .17 RPM |
| SRP051959_colon | 6 .94 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Callithrix jacchus | ENSCJAG00000013474 | within_species_paralog | 2 retrogenes | |
| Mus musculus | ENSMUSG00000000439 | ortholog_one2one | 2 retrogenes | |
| Otolemur garnettii | ENSOGAG00000003255 | ortholog_one2one | 1 retrogene | |
| Pteropus vampyrus | ENSPVAG00000005822 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_cjac_2362 | 98.28 | 98.07 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSCJAG00000016733 retrocopies