Parental gene: | ZNF277, ENSCJAG00000016891 |
| Aliases: | None |
| Description: | None |
| Organism: | Marmoset (Callithrix jacchus) |
| Coordinates: | 8:80998275..81127809(+) |
>ENSCJAG00000016891
ATGGCTGTTCCCAAGACCCAGGGTGCTGTCGCCCGACTGGAGGAAGACCGTGATGGAAGCTGCAGCACAGTCGGGGGTGT
AGGTTATGGGGACAGTAAGGATTGTATCCTGGAGCCACTTTCCCTGCCAGAAAGTCCAGGTGGCACCACCACTTTAGAAG
GTTCTCCATCTGTGCCTTGTATTTTCTGTGAAGAACATTTTCATGTGGCTGAACAAGACAAACTTCTGAAGCACATGATT
ATTGAGCATAAGATTGTCATAGCTGATGTCAAATTGGTCGCTGATTTCCAAAGGTATATTTTGTATTGGAGGAAAAGGTT
CACTGAACAGCCCATCACAGATTTTTGTAGTGTGATAAGAATTAATTCCACTGCTCCATTTGAAGAACAAGAGAATTATT
TTTTGTTATGTGACGTTTTACCAGAAGATAGAATTCTTCGAGAAGAGCTTCAGAAACAGAAACTGAAAGAAATTCTGGAA
CAACAGCAGCAAGAACGAAATGATAACAATTTTCATGGCATTTGTATGTTTTGCAATGAAGAATTCCTTGGAAACAGATC
TGTTCTTTTGAACCACATGGCCAGAGAACATGCTTTCAACATTGGATTGCCAGACAACATTGTAAACTGCAATGAATTTT
TGTGTACATTACAGAAAAAGCTTGACAATTTGCAGTGCTTGTACTGTGAGAAGACCTTCAGGGACAAAAATACACTTAAA
GATCACATGAGGAAAAAACAGCATCGTAAGATTAATCCTAAGAACAGAGAATATGATCGATTTTATGTCATCAATTATTT
GGAACTTGGAAAATCATGGGAAGAAGTTCAGTTGGAAGATGATCGGGAGTTGCTGGACAATCAGGAAGATGACTGGTCTG
ACTGGGAAGAACACCCTGCCTCTGCCGTCTGCTTATTTTGTGAAAAGCAAGCAGAAACAATTGAGAAATTGTATGTCCAC
ATGGAGGATGCACACGAATTTAATCTTCTCAAAATAAAGTCAGAACTTGGATTAAATTTCTATCAGCAAGTGAAACTGGT
CAATTTTATTCGGAGGCAAGTTCACCAGTGCAGATGTTATGGCTGCCATGTGAAGTTCAAATCCAAAGCAGACTTAAGAA
CTCACATGGAAGAAACTAAACACACTTCACTTCTCCCTGATAGAAAGACGTGGGATCAACTGGAGTATTATTTTCCAACC
TATGAAAACGACACTCTCCTGTGTACACTGTCTGACAGTGAAAGTGACCTGACAGCTCAAGAACAAAATGAGGATGTTCC
CATCATCAGTGAAGATACATCTAAACTGTATGCTTTGAAACAAAGCAGTATTTTGAACCAGTTGCTACTACAA
ATGGCTGTTCCCAAGACCCAGGGTGCTGTCGCCCGACTGGAGGAAGACCGTGATGGAAGCTGCAGCACAGTCGGGGGTGT
AGGTTATGGGGACAGTAAGGATTGTATCCTGGAGCCACTTTCCCTGCCAGAAAGTCCAGGTGGCACCACCACTTTAGAAG
GTTCTCCATCTGTGCCTTGTATTTTCTGTGAAGAACATTTTCATGTGGCTGAACAAGACAAACTTCTGAAGCACATGATT
ATTGAGCATAAGATTGTCATAGCTGATGTCAAATTGGTCGCTGATTTCCAAAGGTATATTTTGTATTGGAGGAAAAGGTT
CACTGAACAGCCCATCACAGATTTTTGTAGTGTGATAAGAATTAATTCCACTGCTCCATTTGAAGAACAAGAGAATTATT
TTTTGTTATGTGACGTTTTACCAGAAGATAGAATTCTTCGAGAAGAGCTTCAGAAACAGAAACTGAAAGAAATTCTGGAA
CAACAGCAGCAAGAACGAAATGATAACAATTTTCATGGCATTTGTATGTTTTGCAATGAAGAATTCCTTGGAAACAGATC
TGTTCTTTTGAACCACATGGCCAGAGAACATGCTTTCAACATTGGATTGCCAGACAACATTGTAAACTGCAATGAATTTT
TGTGTACATTACAGAAAAAGCTTGACAATTTGCAGTGCTTGTACTGTGAGAAGACCTTCAGGGACAAAAATACACTTAAA
GATCACATGAGGAAAAAACAGCATCGTAAGATTAATCCTAAGAACAGAGAATATGATCGATTTTATGTCATCAATTATTT
GGAACTTGGAAAATCATGGGAAGAAGTTCAGTTGGAAGATGATCGGGAGTTGCTGGACAATCAGGAAGATGACTGGTCTG
ACTGGGAAGAACACCCTGCCTCTGCCGTCTGCTTATTTTGTGAAAAGCAAGCAGAAACAATTGAGAAATTGTATGTCCAC
ATGGAGGATGCACACGAATTTAATCTTCTCAAAATAAAGTCAGAACTTGGATTAAATTTCTATCAGCAAGTGAAACTGGT
CAATTTTATTCGGAGGCAAGTTCACCAGTGCAGATGTTATGGCTGCCATGTGAAGTTCAAATCCAAAGCAGACTTAAGAA
CTCACATGGAAGAAACTAAACACACTTCACTTCTCCCTGATAGAAAGACGTGGGATCAACTGGAGTATTATTTTCCAACC
TATGAAAACGACACTCTCCTGTGTACACTGTCTGACAGTGAAAGTGACCTGACAGCTCAAGAACAAAATGAGGATGTTCC
CATCATCAGTGAAGATACATCTAAACTGTATGCTTTGAAACAAAGCAGTATTTTGAACCAGTTGCTACTACAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP051959_spleen | 12 .54 RPM |
| SRP051959_skeletal_muscle | 9 .06 RPM |
| SRP051959_lymph_node | 7 .49 RPM |
| SRP051959_lung | 13 .83 RPM |
| SRP051959_liver | 15 .05 RPM |
| SRP051959_kidney | 15 .18 RPM |
| SRP051959_heart | 9 .79 RPM |
| SRP051959_colon | 6 .79 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Mus musculus | ENSMUSG00000055917 | ortholog_one2one | 1 retrogene | |
| Otolemur garnettii | ENSOGAG00000005326 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_cjac_558 | 99.32 | 98.00 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_cjac_698 | 86.28 | 83.37 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSCJAG00000016891 retrocopies