Parental gene: | ENSCJAG00000017177 |
| Aliases: | None |
| Description: | None |
| Organism: | Marmoset (Callithrix jacchus) |
| Coordinates: | 2:84026150..84098040(-) |
>ENSCJAG00000017177
ATGGCTCTGCCGGGAACTCTGAACCTCAATAACGAGGTTGTGAAGATGAGAAAAGAAGTGAAGAGAATTCGAGTTTTGGT
CATCCGAAAACTTGTCAGGAGTGTTGGCAGACTGAAGTCAAAAAAGGGTACTGAAGATGCACTGTTAAAAAACCAAAGAC
GGGCACAACGATTGCTTGAAGAAATCCATGCCATGAAGGAATTGAAACCTGATACAGTAACTAAATCTGCTCTTGGTGAT
GATATCAACTTGGAAAAAATCTGCAAAAAGCCAGATTCTACTGCAACTGAAAGAGCAATTGCCAGACTGGCAGTACATCC
GCTTCTGAAGAAAAAGATAGATGTCCTAAAAGCTGCTGTCCAAGCCTTTAAGGATGCAAGACAAAATGTTGCTGAAGTTG
AGTCATCAAAGAATACTTCAGAGGACAATCATTCTAAGAATACTTTGTATTCAAATGATAATGGAAATAATTCACAGCAT
GAAGGAACTATTATCAGTGAGCAAAAAGTGAAAGAAACCAAAATACTGGCAAAGAAACCAACAAATAATTCAAAGGAAAA
AATAACCAAGGTAGAACATGGAGCTAAAGCTGTGACTATTCAAAATTCTCCATCAAAGCCTTCAGAAAAAAATTCTGTAG
TTTCCCGAGAGTCCCAGAAGACACCTCCTGACGCAACACTGAAAACACTAAGTCAAACCAAAAAAACCAAAAGATCTGAT
AGCTCACTCTGTGGTAACAGTGATGGCGGAGAAGAATCATGTGAAGAGGAGAGGGAGTATTTTGATGATAGCACAGAAGA
AAGGTTTTACAAACAATCTTCCATGTCTGAAGATAGCGATAGTGGTGATGACTTTTTCATTGGGAAAGTCAGACGGACAC
GAAAGAAGGAAAGTAGTCGTCATTATTCAGTTAAGGAACAAAAACCACTCGAAAAAGTATTACTTAAAGAAGATAGAGGT
GAAACTCATGGGGATACAAGAAATGACACAGCCAAGCCAAATACAGAAACCAGAAAGTTGGAATCAGTGTTTTTCCACTC
TTTATCTGGATCTAAAAGCTCTAGAAGAAATTACAAAGAACAGGCTCCAAAAACCAGATCCCTAGATTTTCCACAGAATG
AACCTCAGATCAAGAATCATTTTAATAAAAAACTACAAAGAAAACTTGAAAATACGAAACAGCAATTGCTGCTGCCTCTT
CATCCTTCATGGGAAGCAAGCAGAAGGCGAAAAGAACAGCAGTCTAACATTGCTGTGTTTCAGGGGAAGAAAATTACATT
TGATGATTGA
ATGGCTCTGCCGGGAACTCTGAACCTCAATAACGAGGTTGTGAAGATGAGAAAAGAAGTGAAGAGAATTCGAGTTTTGGT
CATCCGAAAACTTGTCAGGAGTGTTGGCAGACTGAAGTCAAAAAAGGGTACTGAAGATGCACTGTTAAAAAACCAAAGAC
GGGCACAACGATTGCTTGAAGAAATCCATGCCATGAAGGAATTGAAACCTGATACAGTAACTAAATCTGCTCTTGGTGAT
GATATCAACTTGGAAAAAATCTGCAAAAAGCCAGATTCTACTGCAACTGAAAGAGCAATTGCCAGACTGGCAGTACATCC
GCTTCTGAAGAAAAAGATAGATGTCCTAAAAGCTGCTGTCCAAGCCTTTAAGGATGCAAGACAAAATGTTGCTGAAGTTG
AGTCATCAAAGAATACTTCAGAGGACAATCATTCTAAGAATACTTTGTATTCAAATGATAATGGAAATAATTCACAGCAT
GAAGGAACTATTATCAGTGAGCAAAAAGTGAAAGAAACCAAAATACTGGCAAAGAAACCAACAAATAATTCAAAGGAAAA
AATAACCAAGGTAGAACATGGAGCTAAAGCTGTGACTATTCAAAATTCTCCATCAAAGCCTTCAGAAAAAAATTCTGTAG
TTTCCCGAGAGTCCCAGAAGACACCTCCTGACGCAACACTGAAAACACTAAGTCAAACCAAAAAAACCAAAAGATCTGAT
AGCTCACTCTGTGGTAACAGTGATGGCGGAGAAGAATCATGTGAAGAGGAGAGGGAGTATTTTGATGATAGCACAGAAGA
AAGGTTTTACAAACAATCTTCCATGTCTGAAGATAGCGATAGTGGTGATGACTTTTTCATTGGGAAAGTCAGACGGACAC
GAAAGAAGGAAAGTAGTCGTCATTATTCAGTTAAGGAACAAAAACCACTCGAAAAAGTATTACTTAAAGAAGATAGAGGT
GAAACTCATGGGGATACAAGAAATGACACAGCCAAGCCAAATACAGAAACCAGAAAGTTGGAATCAGTGTTTTTCCACTC
TTTATCTGGATCTAAAAGCTCTAGAAGAAATTACAAAGAACAGGCTCCAAAAACCAGATCCCTAGATTTTCCACAGAATG
AACCTCAGATCAAGAATCATTTTAATAAAAAACTACAAAGAAAACTTGAAAATACGAAACAGCAATTGCTGCTGCCTCTT
CATCCTTCATGGGAAGCAAGCAGAAGGCGAAAAGAACAGCAGTCTAACATTGCTGTGTTTCAGGGGAAGAAAATTACATT
TGATGATTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP051959_spleen | 9 .01 RPM |
| SRP051959_skeletal_muscle | 6 .70 RPM |
| SRP051959_lymph_node | 7 .74 RPM |
| SRP051959_lung | 8 .38 RPM |
| SRP051959_liver | 7 .86 RPM |
| SRP051959_kidney | 8 .67 RPM |
| SRP051959_heart | 5 .96 RPM |
| SRP051959_colon | 5 .35 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Monodelphis domestica | ENSMODG00000013487 | ortholog_many2many | 2 retrogenes | |
| Otolemur garnettii | ENSOGAG00000032423 | ortholog_one2many | 1 retrogene | |
| Tarsius syrichta | ENSTSYG00000006869 | ortholog_many2many | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_cjac_1132 | 76.90 | 70.16 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSCJAG00000017177 retrocopies