Parental gene: | ZC3H14, ENSCJAG00000017345 |
| Aliases: | None |
| Description: | zinc finger CCCH-type containing 14 [Source:HGNC Symbol;Acc:20509] |
| Organism: | Marmoset (Callithrix jacchus) |
| Coordinates: | 10:114034596..114086938(+) |
>ENSCJAG00000017345
ATGGAGATCGGCACGGAGATCAGCCGCAAGATCCGGAGTGCCATTAAGGGGAAATTGCAAGAATTAGGAGCTTATATAGA
TGAAGAACTTCCTGATTACATTATGGTGATGGTGGCCAACAAGAAAAGTCAGGACCAAATGACAGAGGATCTATCCCTGT
TTCTAGGGAACAACACCGTTCGATTCACCGTATGGCTTCATGGTGTATTAGATAAACTTCGCTCTGTTACAACTGTACAA
AATCCTTGTGGTCTAAAGTCTTCTGATACCAACATCTTTGATAGTAACGTGTCTTCAAACAAGAGCAGTTTCAGTCGGGG
AGATGAGAGGAGGCATGAAGCTGCAGTGCCACCGCTTGCCATTCCTAGCACTAGACCTGAAAAAAGAGATTCCAGAGTTT
CTACAAGTTCACAGGAGTCAAAGACCACTAATGTCAGGCAGACTTATGATGACGGAGCTGCAACCCGACTAATGTCAACA
GTGAAACCTTTGAGGGAGCCAGCACCCTCTGAAGATGTGATTGATATTAAGCCAGAACCAGATGATCTCATTGATGAAGA
CCTGAACTTTGTGCAGGAGAACCCTTTATCTCAGAAAAAACCTACAGTGACACTTACATATGGTTCTTCTCGCCCTTCTA
TTGAAATTTATCGACCACCTGCAAGTAGAAATGCAGATAGTGGTGTTCATTTAAACAGGTTGCAATTTCAACAGCAGCAA
AATAGTATTCATGCTGCCAAGCAGCTTGATATACAGACTAGTTGGGTATATGAAACAGGACGTTTGTGTGAGCCAGAAGT
GCTTAACAGCTTAGAAGAAACCTATAGTCCGTTCTTTCGAAACAACTCAGAGAAAATGAGTATGGAGGATGAAAACTTTC
GGAAGAGAAAGTTGCCTGTGGTAAGTTCAGTTGTTAAAGTAAAAAAATTCAATCATGATGGAGAAGAGGAGGAAGATGAT
GATGATTTTGGGTCTCGAACAGGAAGCATCTCCAGCAGTGTGTCTGTGCCAGCAAAGCCTGAAAGGAGACCTTCTCTTCC
ACCTTCTAAACAAGCTAACAAGAATCTGATTTTGAAGGCTATATCTGAAGCTCAAGAATCTGTAACAAAAACAACTAACT
ATTCCACAGTCCCACAGAAACAGACACTTCCAGTTGCTCCCAGAACTCGAACTTCTCAAGAAGAATTGCTAGCAGAAGTG
GTCCAGGGACAAAGTAGGACCCCCAGAATAAGCCCCCCCATTAAAGAAGAGGAAACAAAAGGAGATTCCACAGAAAAAAA
TCAAGGTAATAATAGGAGGCAATTATTATGCCGACTACAAATTGACCCAGTAATGGCAGAAACTCTGCAGATCAGTTGGG
ATTACTATGACATGGAATCCATGGTCCATGCAGACACAAGATCATTTATTCTGAAGAAGCCAAAGCTGTCTGAGGAAATA
GTAGTGGCACCAAACCAAGAGTCGGGGATGAAGACTGCAGATTCCCTTCGGGTACTTTCAGGACACCTTATGCAGACACG
AGATCTTGTACAACCAGATAAACCTGCAAGTCCCAAGTTTATAGTGACGCTGGATGGTGTCCCCAGCCCCCCAGGATACA
TGTCAGATCAAGAGGAGGACATGTGCTTTGAAGGAATGAAACCCGTAAACCAAACTGCAGCCTCAAACAAGGGACTCAGA
GGTCTCCTCCACCCACAGCAGTTGCAGTTGCTGAGCAGGCAGCTTGAGGACCCAAATGGTAGCTTTTCCAACGCTGAGAT
GAGTGAACTGAGTGTGGCACAGAAACCAGAAAAACTTTTGGAGCGCTGCAAGTACTGGCCTGCTTGTAAAAACGGGGATG
AGTGTGCCTACCATCACCCCATCTCACCCTGCAAAGCCTTCCCCAATTGTAAATTTGCTGAAAAATGTTTGTTTGTTCAC
CCGAATTGTAAATATGATGCAAAGTGTACGAAACCAGATTGTCCTTTCACTCATGTGAGTAGAAGAATCCCAGTACTGTC
TCCAAAACCAGCAGTTGCACCGCCAGCACCACCTTCCAGTAGTCAGCTCTGCCGCTACTTCCCAGCTTGTAAGAAGATGG
AATGTCCCTTCTATCATCCAAAACACTGTAGGTTTAACACTCAGTGTACGAGACCGGACTGCACATTCTACCATCCTACC
ATTAATGTACCACCACGACATGCCTTGAAATGGATTCGACCTCAAACCAGAGAT
| Library | Parental gene expression (RPM) |
|---|---|
| SRP051959_colon | 32 .82 RPM |
| SRP051959_heart | 41 .04 RPM |
| SRP051959_kidney | 53 .98 RPM |
| SRP051959_liver | 26 .08 RPM |
| SRP051959_lung | 51 .99 RPM |
| SRP051959_lymph_node | 34 .20 RPM |
| SRP051959_skeletal_muscle | 22 .73 RPM |
| SRP051959_spleen | 41 .45 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Bos taurus | ENSBTAG00000030453 | possible_ortholog | 1 retrogene | |
| Felis catus | ENSFCAG00000012898 | possible_ortholog | 1 retrogene | |
| Mus musculus | ENSMUSG00000021012 | ortholog_one2one | 1 retrogene | |
| Otolemur garnettii | ENSOGAG00000005373 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_cjac_1429 | 83.33 | 86.45 | Please wait, loading  |
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Download FASTA sequences of all ENSCJAG00000017345 retrocopies