Parental gene: | FH, ENSCJAG00000017359 |
| Aliases: | None |
| Description: | None |
| Organism: | Marmoset (Callithrix jacchus) |
| Coordinates: | 19:39275025..39294253(+) |
>ENSCJAG00000017359
ATGTACCGAGCACTCCGGCTCCTCGCGCGCTCGCGTCGCCTCTCACGGGCTCCTGCCTCAGCCCCAGCGTCGGCTTCCGG
CTTGGGTGGCGCGGCCGTGCCCTCGTTTTGGCCCCCGAACGCGGCTCGAATGGCAAGCCAGAATTCCTTCCGGGTAGAAT
ATGATACGTTTGGTGAGCTAAAAGTGCCAAATGATAAGTACTATGGTGCCCAGACCGTGAGATCTACGATGAACTTTAAG
ATCGGAGGTGTGACAGAACGCATGCCAACCCCAGTTATTAAAGCTTTTGGCATCTTGAAGCGAGCGGCTGCTGAAGTAAA
CCAGGATTATGGTCTTGATCCAAAGATTGCCAATGCAATAATGAAGGCAGCAGATGAGGTAGCTGAAGGTAAATTAAATG
ATCATTTTCCTCTCGTGGTATGGCAGACTGGATCAGGAACTCAGACAAATATGAATGTAAATGAAGTCATTAGCAATAGA
GCAATTGAAATGTTAGGAGGTGAACTTGGCAGCAAGAAACCTGTGCATCCCAATGATCATGTTAATAAAAGCCAGAGCTC
AAATGATACTTTTCCCACAGCAATGCACATTGCTGCTGCAACAGAAGTTCATGAAGTACTGTTACCAGGACTACAGAAGC
TGCACGATGCTCTTGATGCCAAATCCAAAGAGTTTGCACAGATCATCAAAATTGGGCGCACTCACACTCAGGACGCTGTT
CCACTGACTCTTGGGCAGGAATTTAGTGGTTATGTTCAACAAGTGAAATATGCAATGTCAAGAATAAAAGCTGCCATGCC
AAGAATCTATGAGCTCGCAGCTGGAGGCACTGCTGTTGGTACAGGTTTAAATACTAGAATTGGCTTTGCAGAAAAGGTTG
CCGCAAAAGTGGCTGCACTTACGGGCTTGCCTTTTGTCACTGCTCCAAATAAATTTGAAGCTCTGGCTGCTCATGACGCT
CTGGTTGAGCTCAGTGGAGCCATGAACACTACTGCCTGCAGTCTGATGAAGATAGCAAATGATATTCGTTTTCTGGGTTC
TGGTCCTCGGTCAGGTCTGGGAGAACTGATCTTGCCTGAAAATGAACCAGGAAGCAGTATCATGCCAGGCAAGGTGAACC
CTACTCAGTGTGAAGCAATGACCATGGTTGCAGCCCAAGTCATGGGGAATCACGTTGCTGTAACTGTCGGAGGCAGCAAT
GGACATTTTGAGTTGAATGTTTTCAAGCCAATGATGATTAAAAATGTGTTACACTCAGCCCGGCTGCTGGGGGATGCTTC
AGTTTCCTTTACAGAAAACTGTGTGGTGGGAATCCAGGCCAATACAGAAAGGATCAACAAGCTGATGAATGAGTCTCTAA
TGTTGGTGACAGCTCTCAATCCTCACATAGGGTATGACAAGGCAGCAAAGATTGCTAAGACAGCACACAAAAATGGATCC
ACCTTAAAGGAAACCGCTATTGAACTTGGCTATCTCACAGCAGAGCAGTTTGACGAATGGGTAAAACCTAAGGACATGCT
GGGTCCAAAGTGA
ATGTACCGAGCACTCCGGCTCCTCGCGCGCTCGCGTCGCCTCTCACGGGCTCCTGCCTCAGCCCCAGCGTCGGCTTCCGG
CTTGGGTGGCGCGGCCGTGCCCTCGTTTTGGCCCCCGAACGCGGCTCGAATGGCAAGCCAGAATTCCTTCCGGGTAGAAT
ATGATACGTTTGGTGAGCTAAAAGTGCCAAATGATAAGTACTATGGTGCCCAGACCGTGAGATCTACGATGAACTTTAAG
ATCGGAGGTGTGACAGAACGCATGCCAACCCCAGTTATTAAAGCTTTTGGCATCTTGAAGCGAGCGGCTGCTGAAGTAAA
CCAGGATTATGGTCTTGATCCAAAGATTGCCAATGCAATAATGAAGGCAGCAGATGAGGTAGCTGAAGGTAAATTAAATG
ATCATTTTCCTCTCGTGGTATGGCAGACTGGATCAGGAACTCAGACAAATATGAATGTAAATGAAGTCATTAGCAATAGA
GCAATTGAAATGTTAGGAGGTGAACTTGGCAGCAAGAAACCTGTGCATCCCAATGATCATGTTAATAAAAGCCAGAGCTC
AAATGATACTTTTCCCACAGCAATGCACATTGCTGCTGCAACAGAAGTTCATGAAGTACTGTTACCAGGACTACAGAAGC
TGCACGATGCTCTTGATGCCAAATCCAAAGAGTTTGCACAGATCATCAAAATTGGGCGCACTCACACTCAGGACGCTGTT
CCACTGACTCTTGGGCAGGAATTTAGTGGTTATGTTCAACAAGTGAAATATGCAATGTCAAGAATAAAAGCTGCCATGCC
AAGAATCTATGAGCTCGCAGCTGGAGGCACTGCTGTTGGTACAGGTTTAAATACTAGAATTGGCTTTGCAGAAAAGGTTG
CCGCAAAAGTGGCTGCACTTACGGGCTTGCCTTTTGTCACTGCTCCAAATAAATTTGAAGCTCTGGCTGCTCATGACGCT
CTGGTTGAGCTCAGTGGAGCCATGAACACTACTGCCTGCAGTCTGATGAAGATAGCAAATGATATTCGTTTTCTGGGTTC
TGGTCCTCGGTCAGGTCTGGGAGAACTGATCTTGCCTGAAAATGAACCAGGAAGCAGTATCATGCCAGGCAAGGTGAACC
CTACTCAGTGTGAAGCAATGACCATGGTTGCAGCCCAAGTCATGGGGAATCACGTTGCTGTAACTGTCGGAGGCAGCAAT
GGACATTTTGAGTTGAATGTTTTCAAGCCAATGATGATTAAAAATGTGTTACACTCAGCCCGGCTGCTGGGGGATGCTTC
AGTTTCCTTTACAGAAAACTGTGTGGTGGGAATCCAGGCCAATACAGAAAGGATCAACAAGCTGATGAATGAGTCTCTAA
TGTTGGTGACAGCTCTCAATCCTCACATAGGGTATGACAAGGCAGCAAAGATTGCTAAGACAGCACACAAAAATGGATCC
ACCTTAAAGGAAACCGCTATTGAACTTGGCTATCTCACAGCAGAGCAGTTTGACGAATGGGTAAAACCTAAGGACATGCT
GGGTCCAAAGTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP051959_spleen | 7 .23 RPM |
| SRP051959_skeletal_muscle | 22 .80 RPM |
| SRP051959_lymph_node | 7 .28 RPM |
| SRP051959_lung | 6 .52 RPM |
| SRP051959_liver | 25 .62 RPM |
| SRP051959_kidney | 17 .19 RPM |
| SRP051959_heart | 17 .59 RPM |
| SRP051959_colon | 9 .63 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Echinops telfairi | ENSETEG00000018721 | ortholog_one2one | 2 retrogenes | |
| Microcebus murinus | ENSMICG00000003451 | ortholog_one2one | 2 retrogenes | |
| Mus musculus | ENSMUSG00000026526 | ortholog_one2one | 1 retrogene | |
| Oryctolagus cuniculus | ENSOCUG00000021494 | ortholog_one2many | 1 retrogene | |
| Otolemur garnettii | ENSOGAG00000009936 | ortholog_one2one | 1 retrogene | |
| Rattus norvegicus | ENSRNOG00000003653 | ortholog_one2one | 1 retrogene | |
| Xenopus tropicalis | ENSXETG00000032112 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_cjac_2339 | 99.41 | 100.00 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSCJAG00000017359 retrocopies