Parental gene: | SUPT4H1, ENSCJAG00000017369 |
| Aliases: | None |
| Description: | suppressor of Ty 4 homolog 1 (S. cerevisiae) [Source:HGNC Symbol;Acc:11467] |
| Organism: | Marmoset (Callithrix jacchus) |
| Coordinates: | GL286420.1:601888..608791(-) |
>ENSCJAG00000017369
ATGGCCCTGGAGACCGTGCCGAAGGACCTGCGGCATCTGCGGGCCTGTTTGCTGTGTTCACTGGTCAAGACTATAGACCA
GTTTGAATATGATGGTTGTGACAATTGTGATGCATATCTACAAATGAAGGGTAACCGGGAGATGGTATACGACTGCACCA
GCTCTTCCTTTGATGGAATCATTGCGATGATGAGTCCAGAGGACAGCTGGGTCTCCAAGTGGCAGCGAGTCAGTAACTTT
AAGCCAGGTGTATATGCAGTGTCAGTCACTGGTCGCCTGCCCCAAGGAATCGTGCGGGAGCTGAAAAGTCGAGGAGTGGC
CTACAAATCCAGAGACACAGCTATAAAGACCTAG
ATGGCCCTGGAGACCGTGCCGAAGGACCTGCGGCATCTGCGGGCCTGTTTGCTGTGTTCACTGGTCAAGACTATAGACCA
GTTTGAATATGATGGTTGTGACAATTGTGATGCATATCTACAAATGAAGGGTAACCGGGAGATGGTATACGACTGCACCA
GCTCTTCCTTTGATGGAATCATTGCGATGATGAGTCCAGAGGACAGCTGGGTCTCCAAGTGGCAGCGAGTCAGTAACTTT
AAGCCAGGTGTATATGCAGTGTCAGTCACTGGTCGCCTGCCCCAAGGAATCGTGCGGGAGCTGAAAAGTCGAGGAGTGGC
CTACAAATCCAGAGACACAGCTATAAAGACCTAG
| Library | Parental gene expression (RPM) |
|---|---|
| SRP051959_spleen | 12 .77 RPM |
| SRP051959_skeletal_muscle | 6 .86 RPM |
| SRP051959_lymph_node | 9 .89 RPM |
| SRP051959_lung | 9 .13 RPM |
| SRP051959_liver | 8 .17 RPM |
| SRP051959_kidney | 8 .32 RPM |
| SRP051959_heart | 6 .33 RPM |
| SRP051959_colon | 6 .77 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Dipodomys ordii | ENSDORG00000002826 | ortholog_one2one | 2 retrogenes | |
| Macropus eugenii | ENSMEUG00000010164 | ortholog_one2one | 1 retrogene | |
| Myotis lucifugus | ENSMLUG00000025583 | ortholog_one2one | 1 retrogene | |
| Otolemur garnettii | ENSOGAG00000031972 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_cjac_1196 | 79.31 | 97.44 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_cjac_1990 | 81.90 | 97.44 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_cjac_4216 | 69.23 | 65.81 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSCJAG00000017369 retrocopies