Parental gene: | TRIM8, ENSCJAG00000018057 |
| Aliases: | None |
| Description: | None |
| Organism: | Marmoset (Callithrix jacchus) |
| Coordinates: | 12:90030653..90046768(+) |
>ENSCJAG00000018057
ATGGCTGAGAATTGGAAAAACTGCTTCGAGGAGGAGCTCATCTGCCCCATCTGCCTGCACGTCTTCGTGGAGCCGGTGCA
GCTGCCGTGCAAACACAACTTCTGCCGGGGCTGCATCGGCGAGGCGTGGGCCAAGGACAGCGGCCTCGTGCGCTGCCCAG
AGTGCAACCAGGCCTACAACCAGAAGCCGGGCCTGGAGAAGAACCTGAAGCTCACCAACATCGTAGAGAAGTTCAACGCC
CTGCACGTGGAGAAGCCGCCGGCGGCGCTGCACTGCGTGTTCTGCCGCCGCGGCCCCCCGCTGCCCGCGCAGAAGGTCTG
CCTGCGCTGCGAGGCGCCCTGCTGCCAGTCCCACGTGCAGACGCACCTGCAGCAGCCCTCCACCGCCCGCGGGCACCTCC
TGGTGGAGGCGGACGACGTGCGGGCCTGGAGCTGCCCGCAGCACAACGCCTACCGCCTCTACCACTGCGAGGCCGAGCAG
GTGGCAGTTTGCCAGTACTGCTGCTACTACAGCGGCGCGCATCAGGGACACTCGGTGTGCGACGTGGAGATCCGAAGGAA
TGAAATCCGGAAGATGCTCATGAAGCAGCAGGACCGGCTGGAGGAGCGAGAACAGGACATTGAGGACCAGCTGTACAAAC
TCGAGTCAGACAAGCGACTGGTGGAGGAGAAAGTGAACCAACTGAAGGAGGAAGTTCGGCTGCAGTACGAGAAGCTGCAC
CAGCTGCTAGATGAGGACCTGCGGCAGACAGTGGAGGTCCTGGACAAGGCCCAGGCCAAGTTCTGCAGCGAGAACGCAGC
GCAGGCGCTGCACCTCGGGGAGCGCATGCAGGAGGCCAAGAAGCTGCTGGGCTCCCTGCAGCTGCTGTTTGATAAGACGG
AGGATGTCAGCTTCATGAAGAACACCAAGTCTGTGAAAATCCTGATGGACAGGACCCAGACCTGCACAGGCAGCAGCCTT
TCCCCCCCTAAGATCGGCCACCTGAACTCCAAGCTCTTCCTGAACGAGGTGGCCAAGAAGGAGAAGCAGCTGCGGAAGAT
GCTAGAAGGCCCCTTCAGCACGCCGGTGCCCTTCCTGCAGAGCGTCCCCCTGTACCCTTGCGGCGTCAGCAGCTCTGGGG
CGGAAAAGCGCAAGCACTCAACAGCCTTCCCAGAGGCCAGTTTCCTAGAGACGTCGTCGGGCCCTGTGGGCGGCCAGTAC
GGGGCGGCGGGCACAGCCAGCAGTGAGGGCCAGTCTGGGCAGCCCCTGGGGCCCTGCAGCTCCACGCAGCACTTGGTGGC
CCTGCCGGGCGGTGCCCAACCAGTGCACTCAAGCCCCGTGTTCCCCCCATCGCAGTATCCCAATGGCTCCGCCGCCCAGC
AGCCCATGCTCCCCCAGTATGGCGGCCGCAAGATTCTCGTCTGTTCTGTGGACAACTGTTACTGTTCTTCCGTGGCCAAC
CATGGCGGCCACCAGCCCTACCCCCGCTCCGGCCACTTTCCCTGGACAGTGCCCTCGCAGGAGTACTCACACCCGCTCCC
GCCCACACCCTCCGTCCCCCAGTCCCTTCCCAGCCTGGCGGTCAGAGACTGGCTCGACGCCTCCCAGCAGCCCGGCCACC
AGGATTTCTACAGGGTGTATGGGCAGCCGTCCACCAAACACTACGTGACGAGCTAA
ATGGCTGAGAATTGGAAAAACTGCTTCGAGGAGGAGCTCATCTGCCCCATCTGCCTGCACGTCTTCGTGGAGCCGGTGCA
GCTGCCGTGCAAACACAACTTCTGCCGGGGCTGCATCGGCGAGGCGTGGGCCAAGGACAGCGGCCTCGTGCGCTGCCCAG
AGTGCAACCAGGCCTACAACCAGAAGCCGGGCCTGGAGAAGAACCTGAAGCTCACCAACATCGTAGAGAAGTTCAACGCC
CTGCACGTGGAGAAGCCGCCGGCGGCGCTGCACTGCGTGTTCTGCCGCCGCGGCCCCCCGCTGCCCGCGCAGAAGGTCTG
CCTGCGCTGCGAGGCGCCCTGCTGCCAGTCCCACGTGCAGACGCACCTGCAGCAGCCCTCCACCGCCCGCGGGCACCTCC
TGGTGGAGGCGGACGACGTGCGGGCCTGGAGCTGCCCGCAGCACAACGCCTACCGCCTCTACCACTGCGAGGCCGAGCAG
GTGGCAGTTTGCCAGTACTGCTGCTACTACAGCGGCGCGCATCAGGGACACTCGGTGTGCGACGTGGAGATCCGAAGGAA
TGAAATCCGGAAGATGCTCATGAAGCAGCAGGACCGGCTGGAGGAGCGAGAACAGGACATTGAGGACCAGCTGTACAAAC
TCGAGTCAGACAAGCGACTGGTGGAGGAGAAAGTGAACCAACTGAAGGAGGAAGTTCGGCTGCAGTACGAGAAGCTGCAC
CAGCTGCTAGATGAGGACCTGCGGCAGACAGTGGAGGTCCTGGACAAGGCCCAGGCCAAGTTCTGCAGCGAGAACGCAGC
GCAGGCGCTGCACCTCGGGGAGCGCATGCAGGAGGCCAAGAAGCTGCTGGGCTCCCTGCAGCTGCTGTTTGATAAGACGG
AGGATGTCAGCTTCATGAAGAACACCAAGTCTGTGAAAATCCTGATGGACAGGACCCAGACCTGCACAGGCAGCAGCCTT
TCCCCCCCTAAGATCGGCCACCTGAACTCCAAGCTCTTCCTGAACGAGGTGGCCAAGAAGGAGAAGCAGCTGCGGAAGAT
GCTAGAAGGCCCCTTCAGCACGCCGGTGCCCTTCCTGCAGAGCGTCCCCCTGTACCCTTGCGGCGTCAGCAGCTCTGGGG
CGGAAAAGCGCAAGCACTCAACAGCCTTCCCAGAGGCCAGTTTCCTAGAGACGTCGTCGGGCCCTGTGGGCGGCCAGTAC
GGGGCGGCGGGCACAGCCAGCAGTGAGGGCCAGTCTGGGCAGCCCCTGGGGCCCTGCAGCTCCACGCAGCACTTGGTGGC
CCTGCCGGGCGGTGCCCAACCAGTGCACTCAAGCCCCGTGTTCCCCCCATCGCAGTATCCCAATGGCTCCGCCGCCCAGC
AGCCCATGCTCCCCCAGTATGGCGGCCGCAAGATTCTCGTCTGTTCTGTGGACAACTGTTACTGTTCTTCCGTGGCCAAC
CATGGCGGCCACCAGCCCTACCCCCGCTCCGGCCACTTTCCCTGGACAGTGCCCTCGCAGGAGTACTCACACCCGCTCCC
GCCCACACCCTCCGTCCCCCAGTCCCTTCCCAGCCTGGCGGTCAGAGACTGGCTCGACGCCTCCCAGCAGCCCGGCCACC
AGGATTTCTACAGGGTGTATGGGCAGCCGTCCACCAAACACTACGTGACGAGCTAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP051959_spleen | 12 .12 RPM |
| SRP051959_skeletal_muscle | 5 .96 RPM |
| SRP051959_lymph_node | 16 .73 RPM |
| SRP051959_lung | 19 .46 RPM |
| SRP051959_liver | 6 .06 RPM |
| SRP051959_kidney | 24 .29 RPM |
| SRP051959_heart | 12 .28 RPM |
| SRP051959_colon | 8 .45 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Xenopus tropicalis | ENSXETG00000007381 | possible_ortholog | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_cjac_418 | 93.86 | 94.37 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSCJAG00000018057 retrocopies