Parental gene: | DUS1L, ENSCJAG00000018104 |
| Aliases: | None |
| Description: | None |
| Organism: | Marmoset (Callithrix jacchus) |
| Coordinates: | 5:131224493..131233887(-) |
>ENSCJAG00000018104
ATGCCAAAGCTGCAGGGCTTCGAGTTCTGGAGTCACACCCTTCGGGGGGCCCGCCACGTGGTGGCCCCTATGGTGGACCA
GAGTGAGCTGGCCTGGAGGCTGCTGAGCCGGCGCCACGGGGCACAGCTCTGCTACACGCCCATGCTGCACGCCCAAGTCT
TCGTCCGCGACGCCAATTACCGGAAGGAGAACCTGTACTGCGAGGTGTGCCCCGAGGACCGGCCCCTCATCGTGCAGTTC
TGTGCCAATGACCCGGAGGTGTTTGTTCAGGTGGCTCTCCTGGTTCAGGGTTACTGTGACGCCATCGACATGAACCCGGG
CTGCCCACAGATGATAGCCAAGAGAGGTCACTATGGCGCCTTCCTGCAGGATGAGTGGGACCTGCTCCAAAGAATGATTT
TGCTGGCCCACGAGAAACTCTCTGTTCCCGTCACGTGCAAAATCCTTGTCTTCCCAGAGATTGACAAGACTGTGAGGTAT
GCCCAGATGCTGGAGAAGGCCGGCTGCCAGTTGCTGATCGTTCATGGGTGCACCAAGCAGCAGAAGGTGCCCCTGTCCAG
TGCAGCATCCTGGGAGCACATTAAGGCTGTGCGGAAAGCTGTGGCCATCCCTGTGTTTGCCAATGGGAACATCCAGAGCC
TACAGGATGTGGAGCGCTGCATCCAGGACACGGGTGTACAGGGTGTCATGAGTGCAGAAGGCAACCTGCACAACCCTGCC
CTGTTTGAGGGCCGGAGCCCTGCTGTGTGGGAGCTGGCCGAGGAATACCTGGACATTGTGCGGGAGCACCCCTGCCCACT
GTCCTACGTCCGGGCCCACCTCTTCAAGCTGTGGCATCACACGCTGCAGGTGCATCAGCAGCTGCGAGAGGAGCTGGCCA
AGGTGAAGACCCTGGAGGGCATTGCCGCCGTGAGCCAGGAGCTGAAGATGCGGTGTCAGGAGGAGATATCCAGGCAGGAG
GGAGCAAAACCCACCGGCAACTTGCCCTTCCACTGGATCTGCCAGCCCTATGTCCGGCCGGGGCCCAGGGAGAGGAGTAA
GGAGAAGGCAGGTGCACGAAGCAAGCGGGCCCTGGAGGAGGAGGAGGAATGTGGCACGGAAGTCCTGTCCAAGAACAAGC
AGAAGAAGCAGCTGAGGAACCCCCACAAGACCTTCGACCCCTCTCTGAAGCCAAAATATGCAAAGTGTGACCAGTGTGGC
AACCCAAAGGGCAACAGATGTGTGTTCAGCCTGTGCCGTGGCTGCTGCAAGAGGAGAGCCTCCAAAGAGACCGCGGACTG
CCCAGGTCACGGATTGCTTTTTAAAACCAAATTGGAGAAGTCTTTGATCTGGAAAGGGACCCAGCCTGAGCTGCAGGAGC
CTCAGACGGCCACGCCTGGCACACCAGGTGGCTTCTCAGAAGTCATGAGTAGTGCTCTGGCCTGA
ATGCCAAAGCTGCAGGGCTTCGAGTTCTGGAGTCACACCCTTCGGGGGGCCCGCCACGTGGTGGCCCCTATGGTGGACCA
GAGTGAGCTGGCCTGGAGGCTGCTGAGCCGGCGCCACGGGGCACAGCTCTGCTACACGCCCATGCTGCACGCCCAAGTCT
TCGTCCGCGACGCCAATTACCGGAAGGAGAACCTGTACTGCGAGGTGTGCCCCGAGGACCGGCCCCTCATCGTGCAGTTC
TGTGCCAATGACCCGGAGGTGTTTGTTCAGGTGGCTCTCCTGGTTCAGGGTTACTGTGACGCCATCGACATGAACCCGGG
CTGCCCACAGATGATAGCCAAGAGAGGTCACTATGGCGCCTTCCTGCAGGATGAGTGGGACCTGCTCCAAAGAATGATTT
TGCTGGCCCACGAGAAACTCTCTGTTCCCGTCACGTGCAAAATCCTTGTCTTCCCAGAGATTGACAAGACTGTGAGGTAT
GCCCAGATGCTGGAGAAGGCCGGCTGCCAGTTGCTGATCGTTCATGGGTGCACCAAGCAGCAGAAGGTGCCCCTGTCCAG
TGCAGCATCCTGGGAGCACATTAAGGCTGTGCGGAAAGCTGTGGCCATCCCTGTGTTTGCCAATGGGAACATCCAGAGCC
TACAGGATGTGGAGCGCTGCATCCAGGACACGGGTGTACAGGGTGTCATGAGTGCAGAAGGCAACCTGCACAACCCTGCC
CTGTTTGAGGGCCGGAGCCCTGCTGTGTGGGAGCTGGCCGAGGAATACCTGGACATTGTGCGGGAGCACCCCTGCCCACT
GTCCTACGTCCGGGCCCACCTCTTCAAGCTGTGGCATCACACGCTGCAGGTGCATCAGCAGCTGCGAGAGGAGCTGGCCA
AGGTGAAGACCCTGGAGGGCATTGCCGCCGTGAGCCAGGAGCTGAAGATGCGGTGTCAGGAGGAGATATCCAGGCAGGAG
GGAGCAAAACCCACCGGCAACTTGCCCTTCCACTGGATCTGCCAGCCCTATGTCCGGCCGGGGCCCAGGGAGAGGAGTAA
GGAGAAGGCAGGTGCACGAAGCAAGCGGGCCCTGGAGGAGGAGGAGGAATGTGGCACGGAAGTCCTGTCCAAGAACAAGC
AGAAGAAGCAGCTGAGGAACCCCCACAAGACCTTCGACCCCTCTCTGAAGCCAAAATATGCAAAGTGTGACCAGTGTGGC
AACCCAAAGGGCAACAGATGTGTGTTCAGCCTGTGCCGTGGCTGCTGCAAGAGGAGAGCCTCCAAAGAGACCGCGGACTG
CCCAGGTCACGGATTGCTTTTTAAAACCAAATTGGAGAAGTCTTTGATCTGGAAAGGGACCCAGCCTGAGCTGCAGGAGC
CTCAGACGGCCACGCCTGGCACACCAGGTGGCTTCTCAGAAGTCATGAGTAGTGCTCTGGCCTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP051959_spleen | 12 .16 RPM |
| SRP051959_skeletal_muscle | 30 .97 RPM |
| SRP051959_lymph_node | 12 .15 RPM |
| SRP051959_lung | 11 .26 RPM |
| SRP051959_liver | 24 .11 RPM |
| SRP051959_kidney | 15 .29 RPM |
| SRP051959_heart | 10 .26 RPM |
| SRP051959_colon | 12 .31 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Monodelphis domestica | ENSMODG00000003351 | ortholog_one2many | 1 retrogene | |
| Pan troglodytes | ENSPTRG00000009790 | ortholog_one2many | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_cjac_1422 | 89.26 | 100.00 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_cjac_1887 | 90.13 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_cjac_3451 | 90.91 | 99.79 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_cjac_4002 | 80.91 | 96.84 | Please wait, loading | Please wait, loading | Please wait, loading |
| 5. | retro_cjac_4018 | 84.21 | 55.70 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSCJAG00000018104 retrocopies