Parental gene: | LARP6, ENSCJAG00000018642 |
| Aliases: | None |
| Description: | None |
| Organism: | Marmoset (Callithrix jacchus) |
| Coordinates: | 10:13309084..13331401(-) |
>ENSCJAG00000018642
ATGGCCCAGTCAGGCGGGGAGGCTCGGCCCGGGCCCGAGACGACGGTGCAGATCCGCGTCGCCATCCAGGAGGCCGAGGA
CGTGGACGAGCTGGAGGACGAGGAGGAGGGGGCGGAGACGCGAGGCGCGGGAGACCCTGCCCGGTACCTCAGCCCCGGCT
GGGGCAGCGCCAGCGAGGAGGAGCCGAGCCGCGGGCACAGTGGCACCACTGCAAGTGGAGGCGAGAATGAGCGTGAGGAC
CTGGAGCAGGAGTGGAAGCCCCCGGACGAGGAGTTAATCAAGAAACTGGTGGATCAGATCGAATTCTACTTCTCAGATGA
AAACCTGGAGAAGGACGCCTTTTTGCTAAAGCACGTGAGGAGGAACAAGCTGGGATATGTGAGCGTGAAGCTACTCACAT
CCTTCAAAAAGGTGAAACACCTTACACGGGACTGGAGAACCACAGCACATGCCTTGAAGTATTCAGTGGTCCTTGAGTTG
AATGAGGACCACCGGAAGGTGAGGAGGACCACCCCTGTCCCACTGTTCCCCAATGAGAACCTCCCCAGCAAGATGCTCCT
GGTCTATGATCTCTACCTGTCTCCCAAGCTCTGGGCTCTGGCCACCCCCCAGAAGAATGGAAGGGTACAGGAGAAGGTGA
TGGAACACCTGCTCAAGCTTTTCGGGACTTTTGGAGTCATCTCATCAGTGCGGATCCTCAAACCTGGGAGAGAGCTGCCC
CCTGACATCCGGAGGATCAGCAGCCGCTACAGCCAAGTGGGGACCCAGGAGTGTGCCATCGTGGAGTTTGAGGAGGTGGA
AGCCGCCATCAAAGCCCATGAGTTCATGATCACAGAATCTCAGGGCAAAGAGAACATGAAAGCTGTCCTGATTGGCATGA
AGCCACCCAAAAAGAAACCTGCCAAAGACAAAAATCATGATGAGGAGCCCACTGTGAGCATCCACCTGAACAAGTCCCTG
AACAAGAGAGTCGAGGAGCTTCAGTACATGGGTGATGAGTCTTCCGCCAACAGCTCCTCTGACCCTGAGAGCAACCCCAC
GTCCCCTATGGCAGGCCGACGGCACATGGCCACCAACAAGCTCAGCCCTTCTGGCCACCAGAATCTCTTTCTGAGTCCAA
ATGCCTCCCCGTGCACAAGTCCTTGGAGCAGCCCCTTGGCCCAGCGCAAAGGTGTTTCCAGGAAGTCCCCACTGGCGGAG
GAAGGTAGACTGAACTGCAGCACCAGCCCTGAGATCTTCCGCAAGTGCACAGATTATTCCTCTGACAGCAGCGTCACTCC
CTCTGGCAGCCCCTGGGTCCGGAGGCGCCGCCAAGCCGAAATGGGGACGCAGGAGAAAAGCCCTGGTGCGAGTCCCCTGC
TCTCCCGGAAGATGCAGACTGCAGATGGGTTACCTGTGGGGGTGCTGAGGTTGCCCAGGGGCCCTGACAACACCAGAGGA
TTTCACAGCCATGAGAGGAGCAGGGCCTGTGTATAA
ATGGCCCAGTCAGGCGGGGAGGCTCGGCCCGGGCCCGAGACGACGGTGCAGATCCGCGTCGCCATCCAGGAGGCCGAGGA
CGTGGACGAGCTGGAGGACGAGGAGGAGGGGGCGGAGACGCGAGGCGCGGGAGACCCTGCCCGGTACCTCAGCCCCGGCT
GGGGCAGCGCCAGCGAGGAGGAGCCGAGCCGCGGGCACAGTGGCACCACTGCAAGTGGAGGCGAGAATGAGCGTGAGGAC
CTGGAGCAGGAGTGGAAGCCCCCGGACGAGGAGTTAATCAAGAAACTGGTGGATCAGATCGAATTCTACTTCTCAGATGA
AAACCTGGAGAAGGACGCCTTTTTGCTAAAGCACGTGAGGAGGAACAAGCTGGGATATGTGAGCGTGAAGCTACTCACAT
CCTTCAAAAAGGTGAAACACCTTACACGGGACTGGAGAACCACAGCACATGCCTTGAAGTATTCAGTGGTCCTTGAGTTG
AATGAGGACCACCGGAAGGTGAGGAGGACCACCCCTGTCCCACTGTTCCCCAATGAGAACCTCCCCAGCAAGATGCTCCT
GGTCTATGATCTCTACCTGTCTCCCAAGCTCTGGGCTCTGGCCACCCCCCAGAAGAATGGAAGGGTACAGGAGAAGGTGA
TGGAACACCTGCTCAAGCTTTTCGGGACTTTTGGAGTCATCTCATCAGTGCGGATCCTCAAACCTGGGAGAGAGCTGCCC
CCTGACATCCGGAGGATCAGCAGCCGCTACAGCCAAGTGGGGACCCAGGAGTGTGCCATCGTGGAGTTTGAGGAGGTGGA
AGCCGCCATCAAAGCCCATGAGTTCATGATCACAGAATCTCAGGGCAAAGAGAACATGAAAGCTGTCCTGATTGGCATGA
AGCCACCCAAAAAGAAACCTGCCAAAGACAAAAATCATGATGAGGAGCCCACTGTGAGCATCCACCTGAACAAGTCCCTG
AACAAGAGAGTCGAGGAGCTTCAGTACATGGGTGATGAGTCTTCCGCCAACAGCTCCTCTGACCCTGAGAGCAACCCCAC
GTCCCCTATGGCAGGCCGACGGCACATGGCCACCAACAAGCTCAGCCCTTCTGGCCACCAGAATCTCTTTCTGAGTCCAA
ATGCCTCCCCGTGCACAAGTCCTTGGAGCAGCCCCTTGGCCCAGCGCAAAGGTGTTTCCAGGAAGTCCCCACTGGCGGAG
GAAGGTAGACTGAACTGCAGCACCAGCCCTGAGATCTTCCGCAAGTGCACAGATTATTCCTCTGACAGCAGCGTCACTCC
CTCTGGCAGCCCCTGGGTCCGGAGGCGCCGCCAAGCCGAAATGGGGACGCAGGAGAAAAGCCCTGGTGCGAGTCCCCTGC
TCTCCCGGAAGATGCAGACTGCAGATGGGTTACCTGTGGGGGTGCTGAGGTTGCCCAGGGGCCCTGACAACACCAGAGGA
TTTCACAGCCATGAGAGGAGCAGGGCCTGTGTATAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP051959_spleen | 2 .75 RPM |
| SRP051959_skeletal_muscle | 7 .71 RPM |
| SRP051959_lymph_node | 1 .07 RPM |
| SRP051959_lung | 6 .59 RPM |
| SRP051959_liver | 0 .24 RPM |
| SRP051959_kidney | 3 .24 RPM |
| SRP051959_heart | 12 .38 RPM |
| SRP051959_colon | 1 .58 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Monodelphis domestica | ENSMODG00000001314 | possible_ortholog | 2 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_cjac_3881 | 99.33 | 60.90 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSCJAG00000018642 retrocopies