Parental gene: | CDC16, ENSCJAG00000019010 |
| Aliases: | None |
| Description: | None |
| Organism: | Marmoset (Callithrix jacchus) |
| Coordinates: | 1:29422760..29470503(+) |
>ENSCJAG00000019010
ATGAACCTGGAGCGGCTGCGGAAGCGCGTCCGGCAGTACCTCGACCAGCAACAGTATCAAAGTGCTCTATTTTGGGCAGA
TAAAGTAGCTTCACTCTCTCACGAGGAACCCCAGGACATTTATTGGTTGGCTCAATGTCTTTACCTGACAGCACAATATC
ACAGAGCCGCTCATGCGCTTCGGTCACGAAAACTGGACAAGTTGTATGAAGCATGTCGTTACCTTGCAGCTAGGTGCCAT
TATGCTGCGAAAGAGCACCAGCAGGCCCTGGATATTCTTGATATGGAAGAGCCAATCAACAAAAGATTATTTGAAAAATA
CTTGAAGGATGAAAGTGGCCTCAAAGATCCCTCCAGTGACTGGGAGATGTCACAGTCTTCGATAAAGAGTTCTATTTGTC
TTCTCCGTGGGAAAATCTATGATGCTCTAGATAACCGAACCCTGGCTACCTACAGCTACAAAGAAGCTTTGAAGCTCGAT
GTCTATTGTTTTGAAGCATTTGATCTTTTAACGTCACACCACATGTTGACAGCACAAGAAGAAAAAGAACTTCTTGAATC
GCTACCTCTTAACAAGCTCTGTAATGAAGAACAGGAATTGCTGCGTTTTCTATTTGAGAACAAATTAAAAAAATATAATA
AGCCTAGTGAAACGGTCATCCCTGAGTCTGTAGATGGCTTGCAAGAGAATCTGGATGTGGTAGTGTCTTTAGCTGAGAGA
CATTATTATAACTGTGATTTTAAAATGTGCTGCAAGCTTACTTCTGTAGTGATGGAGAAAGATCCTTTCCATGCAAGTTG
TTTACCTGTACATATAGGGACTCTTGTAGAGCTGAATAAAGCCAATGAACTTTTCTATCTTTCTCATAAACTGGTGGATT
TATATCCTAGTAATCCTGTGTCTTGGTTTGCAGTGGGATGTTACTATCTCATGGTTGGTCATAAAAATGAACATGCCAGA
AGATATCTCAGCAAAGCCACGACGCTTGAGAAAACCTACGGACCTGCATGGATAGCCTATGGACATTCATTTGCAGTGGA
GAGTGAGCATGACCAAGCGATGGCTGCTTACTTCACAGCAGCACAGCTGATGAAAGGGTGTCATTTGCCTATGTTGTATA
TTGGATTGGAATATGGTTTGACCAATAACTCAAAACTAGCTGAAAGGTTCTTCAGCCAAGCTCTGAGCATCGCACCAGAA
GACCCTTTTGTTATGCATGAAGTCGGAGTGGTTGCATTTCAGAATGGAGAGTGGAAAACAGCTGAAAAATGGTTTCTTGA
TGCTTTGGAAAAAATTAAAGCAATTGGGAATGAGGTAACAGTTGACAAATGGGAACCTTTGTTGAACAACTTGGGGCATG
TCTGCAGAAAACTTAAAAAGTACGCTGAGGCCTTGGACTACCACCGCCAGGCACTGGTGTTGATTCCTCAGAACGCATCC
ACCTACTCTGCTATCGGGTATATCCACAGTCTGATGGGCAACTTTGAAAATGCTGTGGACTACTTCCACACAGCCCTTGG
TCTTAGGCGAGATGATACGTTTTCTGTTACAATGCTTGGTCATTGCATCGAAATGTACATTGGTGATTCTGAAGCTTATA
TCGGAGCAGACATTAAAGACAAATTAAAATGTTATGACTTTGATGTGCATACAATGAAGACACTAAAAAACATTATTTCA
CCTCCCTGGGATTTCAGGGAATTTGAAGTAGAAAAACAGACTGCAGAAGAAACGGGGCTTACGCCATTGGAAACCTCAAG
GAAAACTCCTGATTCCAGACCTTCCTTGGAAGAAACCTTTGAAATTGAAATGAATGAAAGTGACATGATGTTAGAGACAT
CTATGTCAGACCATAGCACGTGA
ATGAACCTGGAGCGGCTGCGGAAGCGCGTCCGGCAGTACCTCGACCAGCAACAGTATCAAAGTGCTCTATTTTGGGCAGA
TAAAGTAGCTTCACTCTCTCACGAGGAACCCCAGGACATTTATTGGTTGGCTCAATGTCTTTACCTGACAGCACAATATC
ACAGAGCCGCTCATGCGCTTCGGTCACGAAAACTGGACAAGTTGTATGAAGCATGTCGTTACCTTGCAGCTAGGTGCCAT
TATGCTGCGAAAGAGCACCAGCAGGCCCTGGATATTCTTGATATGGAAGAGCCAATCAACAAAAGATTATTTGAAAAATA
CTTGAAGGATGAAAGTGGCCTCAAAGATCCCTCCAGTGACTGGGAGATGTCACAGTCTTCGATAAAGAGTTCTATTTGTC
TTCTCCGTGGGAAAATCTATGATGCTCTAGATAACCGAACCCTGGCTACCTACAGCTACAAAGAAGCTTTGAAGCTCGAT
GTCTATTGTTTTGAAGCATTTGATCTTTTAACGTCACACCACATGTTGACAGCACAAGAAGAAAAAGAACTTCTTGAATC
GCTACCTCTTAACAAGCTCTGTAATGAAGAACAGGAATTGCTGCGTTTTCTATTTGAGAACAAATTAAAAAAATATAATA
AGCCTAGTGAAACGGTCATCCCTGAGTCTGTAGATGGCTTGCAAGAGAATCTGGATGTGGTAGTGTCTTTAGCTGAGAGA
CATTATTATAACTGTGATTTTAAAATGTGCTGCAAGCTTACTTCTGTAGTGATGGAGAAAGATCCTTTCCATGCAAGTTG
TTTACCTGTACATATAGGGACTCTTGTAGAGCTGAATAAAGCCAATGAACTTTTCTATCTTTCTCATAAACTGGTGGATT
TATATCCTAGTAATCCTGTGTCTTGGTTTGCAGTGGGATGTTACTATCTCATGGTTGGTCATAAAAATGAACATGCCAGA
AGATATCTCAGCAAAGCCACGACGCTTGAGAAAACCTACGGACCTGCATGGATAGCCTATGGACATTCATTTGCAGTGGA
GAGTGAGCATGACCAAGCGATGGCTGCTTACTTCACAGCAGCACAGCTGATGAAAGGGTGTCATTTGCCTATGTTGTATA
TTGGATTGGAATATGGTTTGACCAATAACTCAAAACTAGCTGAAAGGTTCTTCAGCCAAGCTCTGAGCATCGCACCAGAA
GACCCTTTTGTTATGCATGAAGTCGGAGTGGTTGCATTTCAGAATGGAGAGTGGAAAACAGCTGAAAAATGGTTTCTTGA
TGCTTTGGAAAAAATTAAAGCAATTGGGAATGAGGTAACAGTTGACAAATGGGAACCTTTGTTGAACAACTTGGGGCATG
TCTGCAGAAAACTTAAAAAGTACGCTGAGGCCTTGGACTACCACCGCCAGGCACTGGTGTTGATTCCTCAGAACGCATCC
ACCTACTCTGCTATCGGGTATATCCACAGTCTGATGGGCAACTTTGAAAATGCTGTGGACTACTTCCACACAGCCCTTGG
TCTTAGGCGAGATGATACGTTTTCTGTTACAATGCTTGGTCATTGCATCGAAATGTACATTGGTGATTCTGAAGCTTATA
TCGGAGCAGACATTAAAGACAAATTAAAATGTTATGACTTTGATGTGCATACAATGAAGACACTAAAAAACATTATTTCA
CCTCCCTGGGATTTCAGGGAATTTGAAGTAGAAAAACAGACTGCAGAAGAAACGGGGCTTACGCCATTGGAAACCTCAAG
GAAAACTCCTGATTCCAGACCTTCCTTGGAAGAAACCTTTGAAATTGAAATGAATGAAAGTGACATGATGTTAGAGACAT
CTATGTCAGACCATAGCACGTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP051959_spleen | 52 .92 RPM |
| SRP051959_skeletal_muscle | 26 .45 RPM |
| SRP051959_lymph_node | 50 .25 RPM |
| SRP051959_lung | 39 .27 RPM |
| SRP051959_liver | 51 .18 RPM |
| SRP051959_kidney | 33 .94 RPM |
| SRP051959_heart | 30 .85 RPM |
| SRP051959_colon | 25 .76 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Microcebus murinus | ENSMICG00000012596 | ortholog_one2one | 1 retrogene | |
| Myotis lucifugus | ENSMLUG00000015888 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_cjac_1884 | 85.13 | 50.65 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSCJAG00000019010 retrocopies