Parental gene:

TRMT5, ENSCJAG00000019157

Aliases:None
Description:tRNA methyltransferase 5 [Source:HGNC Symbol;Acc:23141]
Organism:Marmoset (Callithrix jacchus)
Coordinates:10:85986081..85992384(-)


>ENSCJAG00000019157
ATGGTGCTTAGGATCTTATGGAGGCCATTTGGATTCTCAAGAAGACTTGTGAAACTGGGAAGCCATAGCATAACTGAATC
AAAATCATTAATTCCACTAGCTTGGACATCCCTGACACAGACGCTTTCAGAAGCACCTGGTATTCTCTTATTGGGTCAAA
GAAAAATATTCTCAACCATGCCAGAAATAGAAACACATGAGAGAGACTCTGAATTGTTTTCACCACCCTCTGATGTCCGA
GGCATGACAAAACTTGATAGAACAGCTTTTAAAAAGACAGTCAGCATTCCAGTGCTTAAAGTGAGGAAAGAAGTAGTCAG
TAAATTGATGCGATCCCTTAAAAGGGCAGCATTGCAGCGCCCAGGTGTAAAACGTGTAATTGAAGATCCAGAAGATAAAG
AAAGTAGACTAATCATGTTGGATCCCTATAAAATGTTTACTCATGATTCCTTTGAGGAAGCAGAACTCAGTGTTTTAGAG
CAATTAAATGTCAGTCCACAGATCTCTGAATATAATTTGGAACTAACATATGAAAACTTTAAGTCAGAAGAGATCTTGAG
AGCTGTGCTTCCTGAAGGTCAAGATGTAACTTCAGGGTTTAGCAGAGTTGGACATATTGCACACCTGAACCTTCGAGATC
ATCAGCTACCTTTCAAACATTTAATTGGCCAGGTTATGATTGACAAAAATCCAGGAATCACCTCAGCAGTAAATAAAATA
AATAATATTGACAATACATACCGAAATTTCCAAATGGAAGTGCTATCTGGAGAACAGAACATGATGACAAAGGTTCGAGA
AAACAACTACACCTATGAGTTTGATTTTTCAAAAGTCTATTGGAATCCTCGTCTCTCTACAGAACACAGCCGTATCACAG
AACTTCTCAAGCCTGGGGATGTCCTATTTGATGTTTTTGCTGGGGTTGGGCCCTTTGCCATTCCAGTAGCAAAGAAAAAC
TGCACTGTATTTGCCAATGATCTCAATCCTGAATCCCATAAGTGGCTATTGCACAATTGTAAATTAAATAAAGTGGACCA
AAATGTGAAAGTCTTCAACTTGGATGGGAAGGACTTCCTCCAAGGACCCATCAAAGAAGAGTTAATGCAGCTGTTGAGTC
TGTCAAAAGAAAGAAAACCCTCTGTGCACATTGTCATGAATTTGCCAGCAAAAGCTATAGAGTTTCTTAGTGCTTTCAAA
TCACTTTTAGATGAGCAGCCATGCAGCAGTGAACTACTTCCCATAGTGCACTGTTACAGCTTTTCCAAAGATGCTAACCC
TACTGAAGACGTTCGTCAAAGAGCTGGAGCTGTGTTAGGCATTTCACTGGAGGCATGCAGTTCAGTTCACCTGGTAAGAA
ATGTGGCCCCAAACAAGGAAATGCTGTGCATCACCTTTCAGATTCCTGCTGCTGTACTCTACAAGAACCAGACCAGAAAT
CCAGAGAATTGCGAAGATCCGCCTCTTAAAAGGCAGAGGACAGCTGAAGCCTTTTCAGATGAAAAAACACAAATTGCTTC
AAACACTTAA

Library Parental gene expression (RPM)
SRP051959_spleen 5 .48 RPM
SRP051959_skeletal_muscle 5 .31 RPM
SRP051959_lymph_node 3 .63 RPM
SRP051959_lung 4 .42 RPM
SRP051959_liver 5 .57 RPM
SRP051959_kidney 5 .01 RPM
SRP051959_heart 3 .74 RPM
SRP051959_colon 4 .30 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000011796 ortholog_one2one 1 retrogene
retro_btau_405,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cjac_1974 99.02 100.00
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Download FASTA sequences of all ENSCJAG00000019157 retrocopies