Parental gene: | NUPL1, ENSCJAG00000019231 |
| Aliases: | None |
| Description: | nucleoporin like 1 [Source:HGNC Symbol;Acc:20261] |
| Organism: | Marmoset (Callithrix jacchus) |
| Coordinates: | 5:138276354..138316841(+) |
>ENSCJAG00000019231
ATGTCCACGGGGTTCTCCTTCGGGTCCGGGACTTTGGGCTCCACTACCGTGGCCCCCGGCGGGACCGGCACAGGCGGCGG
TTTCTCTTTTGGGACGGGAGCGTCTAGCAACCCTTCTGTGGGGCTCAATTTTGGAACTCTTGGAAGTACTGCAACTCCAA
CAACTACATCTGCTCCTTCAAGTGGTTTTGGAACCGGGCTCTTTGGATCTAAACCTGCTACTGGGTTCACTCTAGGAGGA
ACAAACACAGGAATAGCAACAACGATAACTACAGGATTAACTCTGGGAACACCAGCCACTACATCTGCCCCTACAACAGG
CTTCAGTTTAGGATTCAATAAACCTGCAGCATCTGCCACACCATTTGCTCTACCTATTACTTCTACCTCAGCTAGCGGTC
TCACTCTTTCGTCTGCTCTGACATCAACTCCAGCAGCTTCCACAGGATTTACCCTAAATAATTTGGGTGGGACAACAGCC
ACAACTACAACTGCGTCAACAGGCCTCTCTTTAGGGGGAGCCTTAGCCGGTTTGGGAGGTTCACTTTTCCAGAGCACAAA
CACAGCAACATCAGGACTAGGACAGAATGCTTTAGGCTTGACTTTGGGAACTACAGCAGCTACTTCAGCTGCAGGCAATG
AAGGCCTTGGTGGCATAGATTTTAGTAGCTCCTCAGATAAAAAGAGTGATAAAACAGGAACAAGACCAGAGGATAGTAAA
GCTCTGAAGGATGAAAATCTACCTCCTGTCATCTGCCAGGATGTTGAAAATCTCCAGAAATTTGTCAAGGAGCAGAAACA
AGTTCAAGAAGAAATTAGTAGAATGTCTTCAAAAGCAATGCTTAAGGTACAAGAAGATATTAAAGCTCTGAAGCAGCTCC
TGTCCTTGGCTGCCAATGGACTACAGAGAAACACTCTCAACATTGACAAATTGAAAATAGAAACTGCTCAGGAGTTAAAG
AATGCTGAAATAGCTTTAAGAACCCAGAAGACACCACCTGGACTTCAACATGAATATGCAGCTCCTGCTGACTACTTCAG
AATCTTGGTTCAGCAATTTGAGGTACAGCTTCAGCAATACAGACAACAGATTGAAGAACTAGAAAACCATCTTGCCACTC
AAGCAAATAATTCACATATAACCCCTCAAGATTTGTCAATGGCTATGCAGAAAATTTATCAAACCTTTGTAGCTTTAGCA
GCACAACTTCAGTCTATTCATGAAAATGTAAAGGTTCTGAAAGAACAGTACCTTGGCTACAGGAAAATGTTCTTGGGAGA
TGCTGTTGATGTGTTTGAAGCAAGACGAGCAGAAGCCAAGAAGTGGCAGAACACACCCAGAGTTACTACTGGACCCACCC
CTTTCAGCACCATGCCAAATGCAGCAGCCGTTGCCATGGCTGCAACACTTACACAGCAGCAACAGCCTGCTACAGGGCCA
CAGCCATCTCTGGGAGTTAGTTTTGGAACGCCATTCGGCTCAGGTATTGGCACTGGCTTGCAATCAAGTGGCTTAGGTTC
TTCAAACCTTGGAGGATTTGGAACTAGCTCTGGTTTTGGATGCAGCACCACAGGGGCCTCCACATTTGGATTTGGAACAA
CAAATAAACCCTCAGGAAGTCTTAGTGCAGGCTTTGGCAGCTCAAGTACATCTGGGTTTAACTTCAGCAATCCTGGCATC
ACGGCATCAGCTGGTTTGACTTTTGGGGTGTCCAATCCTGCCTCTGCAGGTTTTGGAACAGGAGGACAACTCCTTCAGTT
GAAGAAACCTCCAGCTGGAAACAAAAGAGGAAAAAGATAA
ATGTCCACGGGGTTCTCCTTCGGGTCCGGGACTTTGGGCTCCACTACCGTGGCCCCCGGCGGGACCGGCACAGGCGGCGG
TTTCTCTTTTGGGACGGGAGCGTCTAGCAACCCTTCTGTGGGGCTCAATTTTGGAACTCTTGGAAGTACTGCAACTCCAA
CAACTACATCTGCTCCTTCAAGTGGTTTTGGAACCGGGCTCTTTGGATCTAAACCTGCTACTGGGTTCACTCTAGGAGGA
ACAAACACAGGAATAGCAACAACGATAACTACAGGATTAACTCTGGGAACACCAGCCACTACATCTGCCCCTACAACAGG
CTTCAGTTTAGGATTCAATAAACCTGCAGCATCTGCCACACCATTTGCTCTACCTATTACTTCTACCTCAGCTAGCGGTC
TCACTCTTTCGTCTGCTCTGACATCAACTCCAGCAGCTTCCACAGGATTTACCCTAAATAATTTGGGTGGGACAACAGCC
ACAACTACAACTGCGTCAACAGGCCTCTCTTTAGGGGGAGCCTTAGCCGGTTTGGGAGGTTCACTTTTCCAGAGCACAAA
CACAGCAACATCAGGACTAGGACAGAATGCTTTAGGCTTGACTTTGGGAACTACAGCAGCTACTTCAGCTGCAGGCAATG
AAGGCCTTGGTGGCATAGATTTTAGTAGCTCCTCAGATAAAAAGAGTGATAAAACAGGAACAAGACCAGAGGATAGTAAA
GCTCTGAAGGATGAAAATCTACCTCCTGTCATCTGCCAGGATGTTGAAAATCTCCAGAAATTTGTCAAGGAGCAGAAACA
AGTTCAAGAAGAAATTAGTAGAATGTCTTCAAAAGCAATGCTTAAGGTACAAGAAGATATTAAAGCTCTGAAGCAGCTCC
TGTCCTTGGCTGCCAATGGACTACAGAGAAACACTCTCAACATTGACAAATTGAAAATAGAAACTGCTCAGGAGTTAAAG
AATGCTGAAATAGCTTTAAGAACCCAGAAGACACCACCTGGACTTCAACATGAATATGCAGCTCCTGCTGACTACTTCAG
AATCTTGGTTCAGCAATTTGAGGTACAGCTTCAGCAATACAGACAACAGATTGAAGAACTAGAAAACCATCTTGCCACTC
AAGCAAATAATTCACATATAACCCCTCAAGATTTGTCAATGGCTATGCAGAAAATTTATCAAACCTTTGTAGCTTTAGCA
GCACAACTTCAGTCTATTCATGAAAATGTAAAGGTTCTGAAAGAACAGTACCTTGGCTACAGGAAAATGTTCTTGGGAGA
TGCTGTTGATGTGTTTGAAGCAAGACGAGCAGAAGCCAAGAAGTGGCAGAACACACCCAGAGTTACTACTGGACCCACCC
CTTTCAGCACCATGCCAAATGCAGCAGCCGTTGCCATGGCTGCAACACTTACACAGCAGCAACAGCCTGCTACAGGGCCA
CAGCCATCTCTGGGAGTTAGTTTTGGAACGCCATTCGGCTCAGGTATTGGCACTGGCTTGCAATCAAGTGGCTTAGGTTC
TTCAAACCTTGGAGGATTTGGAACTAGCTCTGGTTTTGGATGCAGCACCACAGGGGCCTCCACATTTGGATTTGGAACAA
CAAATAAACCCTCAGGAAGTCTTAGTGCAGGCTTTGGCAGCTCAAGTACATCTGGGTTTAACTTCAGCAATCCTGGCATC
ACGGCATCAGCTGGTTTGACTTTTGGGGTGTCCAATCCTGCCTCTGCAGGTTTTGGAACAGGAGGACAACTCCTTCAGTT
GAAGAAACCTCCAGCTGGAAACAAAAGAGGAAAAAGATAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP051959_spleen | 22 .77 RPM |
| SRP051959_skeletal_muscle | 24 .90 RPM |
| SRP051959_lymph_node | 23 .20 RPM |
| SRP051959_lung | 23 .99 RPM |
| SRP051959_liver | 14 .66 RPM |
| SRP051959_kidney | 24 .27 RPM |
| SRP051959_heart | 21 .29 RPM |
| SRP051959_colon | 22 .36 RPM |
No homologs available
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_cjac_769 | 92.54 | 79.56 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSCJAG00000019231 retrocopies