Parental gene: | ENSCJAG00000019406 |
| Aliases: | None |
| Description: | None |
| Organism: | Marmoset (Callithrix jacchus) |
| Coordinates: | 14:19933945..19996247(+) |
>ENSCJAG00000019406
ATGGGGCTGTTTGGAAAAACCCAGGAGAAGCCACCCAAAGAACTGGTCAATGAATGGTCACTGAAGATAAGAAAGGAAAT
GAGAGTTGTTGACAGGCAAATAAGAGATATCCAAAGAGAAGAAGAAAAAGTGAAACGATCTGTGAAAGATGCAGCCAAGA
AGGGCCAGAAGGATGTCTGTGTAGTTCTGGCTAAGGAGATGATCAGGTCAAGGAAGGCCGTGAGCAAGCTGTATGCATCC
AAAGCACACATGAACTCGGTACTCATGGGGATGAAGAACCAGCTCGCGGTCTTGCGAGTGGCTGGTTCCCTGCAGAAGAG
CACAGAAGTGATGAAGGCCATGCAAAGTCTTGTGAAGATTCCAGAAATTCAGGCCACCATGAGGGAGCTGTCCAAAGAAA
TGATGAAGGCTGGGATCATAGAGGAGATGTTAGAGGACACTTTTGAAAGCATGGATGATCAGGAAGAAATGGAGGAAGAA
GCAGAAATGGAAATTGACAAAATTCTATTTGAAATTACAGCAGGGGCCTTGGGCAAAGCACCCAGTAAAGTGACTGATGC
CCTTCCAGAGCCAGAGCCTTCAGGAGCGATGGCTCCCTCAGAGGATGAGGAGGAGGAAGAAGCCCTGGAGGCCATGCAGT
CCAGGCTGGCCACACTCCGAAGCTAA
ATGGGGCTGTTTGGAAAAACCCAGGAGAAGCCACCCAAAGAACTGGTCAATGAATGGTCACTGAAGATAAGAAAGGAAAT
GAGAGTTGTTGACAGGCAAATAAGAGATATCCAAAGAGAAGAAGAAAAAGTGAAACGATCTGTGAAAGATGCAGCCAAGA
AGGGCCAGAAGGATGTCTGTGTAGTTCTGGCTAAGGAGATGATCAGGTCAAGGAAGGCCGTGAGCAAGCTGTATGCATCC
AAAGCACACATGAACTCGGTACTCATGGGGATGAAGAACCAGCTCGCGGTCTTGCGAGTGGCTGGTTCCCTGCAGAAGAG
CACAGAAGTGATGAAGGCCATGCAAAGTCTTGTGAAGATTCCAGAAATTCAGGCCACCATGAGGGAGCTGTCCAAAGAAA
TGATGAAGGCTGGGATCATAGAGGAGATGTTAGAGGACACTTTTGAAAGCATGGATGATCAGGAAGAAATGGAGGAAGAA
GCAGAAATGGAAATTGACAAAATTCTATTTGAAATTACAGCAGGGGCCTTGGGCAAAGCACCCAGTAAAGTGACTGATGC
CCTTCCAGAGCCAGAGCCTTCAGGAGCGATGGCTCCCTCAGAGGATGAGGAGGAGGAAGAAGCCCTGGAGGCCATGCAGT
CCAGGCTGGCCACACTCCGAAGCTAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP051959_spleen | 29 .66 RPM |
| SRP051959_skeletal_muscle | 21 .07 RPM |
| SRP051959_lymph_node | 16 .76 RPM |
| SRP051959_lung | 28 .70 RPM |
| SRP051959_liver | 18 .65 RPM |
| SRP051959_kidney | 34 .23 RPM |
| SRP051959_heart | 29 .06 RPM |
| SRP051959_colon | 31 .42 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Canis familiaris | ENSCAFG00000007479 | ortholog_one2one | 1 retrogene | |
| Cavia porcellus | ENSCPOG00000001723 | ortholog_one2one | 1 retrogene | |
| Macropus eugenii | ENSMEUG00000009111 | ortholog_one2one | 1 retrogene | |
| Microcebus murinus | ENSMICG00000005492 | possible_ortholog | 3 retrogenes | |
| Mus musculus | ENSMUSG00000053119 | ortholog_one2one | 1 retrogene | |
| Oryctolagus cuniculus | ENSOCUG00000029277 | ortholog_one2one | 1 retrogene | |
| Ochotona princeps | ENSOPRG00000002191 | ortholog_one2one | 2 retrogenes | |
| Sorex araneus | ENSSARG00000008917 | possible_ortholog | 1 retrogene | |
| Tursiops truncatus | ENSTTRG00000010400 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_cjac_2032 | 89.66 | 52.49 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_cjac_2784 | 90.50 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSCJAG00000019406 retrocopies