Parental gene: | KITLG, ENSCJAG00000019661 |
| Aliases: | None |
| Description: | KIT ligand [Source:HGNC Symbol;Acc:6343] |
| Organism: | Marmoset (Callithrix jacchus) |
| Coordinates: | 9:79717958..79798785(+) |
>ENSCJAG00000019661
ATGAAGAAGACACAAACTTGGATTCTCACTTGCATTTATCTTCAACTGTTCCTATTTAATCCTTTCGTCAAAACTGAAGG
GGTCTGCAGGAATCGTGTGACTAATAATGTAAAAGACGTCACTAAATTGGTGGCAAATCTTCCGAAAGACTATATGATAA
CCCTCAAATATGTCCCCGGGATGGATGTTTTGCCAAGTCATTGCTGGATAAGTGAGATGGTAGTACAGTTGTCAAGCAGC
TTGACTGATCTTCTGGACAAGTTTTCAAATATTTCTGAAGGCTTGAGTAATTATTCTATCATAGACAAACTTGTGAACAT
AGTGGATGACCTTGTGGAGTGCGTGAAAGAAAACTCATCTAAGGATCTAAAAAAACCATTCAAGAGCCCAGAACCCAGGC
TCTTTACTCCTGAAGAATTCTTTAGAATTTTTAATAGATCTATTGATGCCTTCAAGGACTTTGTAGTGGCATCTGAAACT
AGTGATTGTATGGCTTCTTCAACATTAAGTCCTGAGAAAGATTCCAGAGTCAGTGTCACAAAACCATTTATGTTACCCTC
TGTTGCAGCCAACTCCCTTAGGAATGACAGCAGTAGCAGTAATAGGAAGGCCAAAAATCCCCCTGGAGACTCCGGCCTAC
ACTGGGCAGCCATGGCATTGCCAGCACTCTTTTCTCTTATAATTGGCTTTGCTTTTGGAGCCTTATACTGGAAGAAGAGA
CAACCAAGTCTTACAAGGACAGTTGAAAATATACAAATTAATGAAGAGGATAATGAGATAAGTATGTTGCAAGAGAAAGA
GAGAGAATTTCAAGAAGTGTAA
ATGAAGAAGACACAAACTTGGATTCTCACTTGCATTTATCTTCAACTGTTCCTATTTAATCCTTTCGTCAAAACTGAAGG
GGTCTGCAGGAATCGTGTGACTAATAATGTAAAAGACGTCACTAAATTGGTGGCAAATCTTCCGAAAGACTATATGATAA
CCCTCAAATATGTCCCCGGGATGGATGTTTTGCCAAGTCATTGCTGGATAAGTGAGATGGTAGTACAGTTGTCAAGCAGC
TTGACTGATCTTCTGGACAAGTTTTCAAATATTTCTGAAGGCTTGAGTAATTATTCTATCATAGACAAACTTGTGAACAT
AGTGGATGACCTTGTGGAGTGCGTGAAAGAAAACTCATCTAAGGATCTAAAAAAACCATTCAAGAGCCCAGAACCCAGGC
TCTTTACTCCTGAAGAATTCTTTAGAATTTTTAATAGATCTATTGATGCCTTCAAGGACTTTGTAGTGGCATCTGAAACT
AGTGATTGTATGGCTTCTTCAACATTAAGTCCTGAGAAAGATTCCAGAGTCAGTGTCACAAAACCATTTATGTTACCCTC
TGTTGCAGCCAACTCCCTTAGGAATGACAGCAGTAGCAGTAATAGGAAGGCCAAAAATCCCCCTGGAGACTCCGGCCTAC
ACTGGGCAGCCATGGCATTGCCAGCACTCTTTTCTCTTATAATTGGCTTTGCTTTTGGAGCCTTATACTGGAAGAAGAGA
CAACCAAGTCTTACAAGGACAGTTGAAAATATACAAATTAATGAAGAGGATAATGAGATAAGTATGTTGCAAGAGAAAGA
GAGAGAATTTCAAGAAGTGTAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP051959_spleen | 0 .76 RPM |
| SRP051959_skeletal_muscle | 5 .70 RPM |
| SRP051959_lymph_node | 0 .64 RPM |
| SRP051959_lung | 23 .70 RPM |
| SRP051959_liver | 0 .19 RPM |
| SRP051959_kidney | 7 .06 RPM |
| SRP051959_heart | 4 .82 RPM |
| SRP051959_colon | 2 .35 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Oryctolagus cuniculus | ENSOCUG00000017687 | ortholog_one2one | 1 retrogene | |
| Otolemur garnettii | ENSOGAG00000009638 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_cjac_3502 | 90.86 | 73.53 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_cjac_3860 | 89.71 | 64.10 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSCJAG00000019661 retrocopies