Parental gene:

KITLG, ENSCJAG00000019661

Aliases:None
Description:KIT ligand [Source:HGNC Symbol;Acc:6343]
Organism:Marmoset (Callithrix jacchus)
Coordinates:9:79717958..79798785(+)


>ENSCJAG00000019661
ATGAAGAAGACACAAACTTGGATTCTCACTTGCATTTATCTTCAACTGTTCCTATTTAATCCTTTCGTCAAAACTGAAGG
GGTCTGCAGGAATCGTGTGACTAATAATGTAAAAGACGTCACTAAATTGGTGGCAAATCTTCCGAAAGACTATATGATAA
CCCTCAAATATGTCCCCGGGATGGATGTTTTGCCAAGTCATTGCTGGATAAGTGAGATGGTAGTACAGTTGTCAAGCAGC
TTGACTGATCTTCTGGACAAGTTTTCAAATATTTCTGAAGGCTTGAGTAATTATTCTATCATAGACAAACTTGTGAACAT
AGTGGATGACCTTGTGGAGTGCGTGAAAGAAAACTCATCTAAGGATCTAAAAAAACCATTCAAGAGCCCAGAACCCAGGC
TCTTTACTCCTGAAGAATTCTTTAGAATTTTTAATAGATCTATTGATGCCTTCAAGGACTTTGTAGTGGCATCTGAAACT
AGTGATTGTATGGCTTCTTCAACATTAAGTCCTGAGAAAGATTCCAGAGTCAGTGTCACAAAACCATTTATGTTACCCTC
TGTTGCAGCCAACTCCCTTAGGAATGACAGCAGTAGCAGTAATAGGAAGGCCAAAAATCCCCCTGGAGACTCCGGCCTAC
ACTGGGCAGCCATGGCATTGCCAGCACTCTTTTCTCTTATAATTGGCTTTGCTTTTGGAGCCTTATACTGGAAGAAGAGA
CAACCAAGTCTTACAAGGACAGTTGAAAATATACAAATTAATGAAGAGGATAATGAGATAAGTATGTTGCAAGAGAAAGA
GAGAGAATTTCAAGAAGTGTAA

Library Parental gene expression (RPM)
SRP051959_colon 2 .35 RPM
SRP051959_heart 4 .82 RPM
SRP051959_kidney 7 .06 RPM
SRP051959_liver 0 .19 RPM
SRP051959_lung 23 .70 RPM
SRP051959_lymph_node 0 .64 RPM
SRP051959_skeletal_muscle 5 .70 RPM
SRP051959_spleen 0 .76 RPM



Species Parental gene accession Homology type Retrogenes number
Oryctolagus cuniculus ENSOCUG00000017687 ortholog_one2one 1 retrogene
retro_ocun_560,
Otolemur garnettii ENSOGAG00000009638 ortholog_one2one 1 retrogene
retro_ogar_2863,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cjac_3502 90.86 73.53
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2. retro_cjac_3860 89.71 64.10
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Download FASTA sequences of all ENSCJAG00000019661 retrocopies