Parental gene: | CAPG, ENSCJAG00000019705 |
| Aliases: | None |
| Description: | capping protein (actin filament), gelsolin-like [Source:HGNC Symbol;Acc:1474] |
| Organism: | Marmoset (Callithrix jacchus) |
| Coordinates: | 14:21165922..21183110(+) |
>ENSCJAG00000019705
ATGTACACAGCCATTCCCCAGAGCAGTGGCTCTCCATTTTCGGCCTCAGTGCAGGATCCAGGCCTGCATGTATGGCGGGT
GGAGAAGCTGAAGCCCGTGCCTGTGGCACGGGAGAACCAGGGCGTCTTCTTCTCCGGGGACTCCTACCTAGTGCTGCACA
ATGGCCCAGAAGAGGTTTCCCATCTGCACCTGTGGATAGGCCAGCAATCATCCCGGGATGAGCAGGGGGCCTGTGCCGTG
CTGGCTGTGCACCTCAACACGCTGCTGGGAGAGCGGCCTGTGCAGCACCGTGAGGTGCAGGGCAATGAGTCCGATCTCTT
CATGAGCTACTTCCCACGGGGCCTCAAGTACCAGGAAGGTGGTGTGGAGTCGGCATTTCATAAGACCTCCTCAGGAGCCC
CAGCTGCCATCAAGAAACTCTACCAGGTGAAGGGGAAGAAGAACATTCGTGCCACTGAGCGGGCACTGAGCTGGGACAGC
TTCAACACGGGGGACTGCTTCATCCTGGACCTGGGCCAGAACATCTTCGCCTGGTGTGGTGGCAAGTCCAACATCCTGGA
ACGAAACAAGGCGAGAGACCTGGCCCTGGCCATCCGGGACAGTGAGCGACAGGGCAAGGCCCAGGTGGAGATTGTCACTG
ATGGGGAGGAGCCTGCTGAGATGATCCAGGGTCCTGGGCCCCAAGCTGCTCTGAAGGAGGGCAACCCGGAGGAAGACCTC
ACAGCTGACCAGACAAATTCCCAAGCCGCAGCTCTGTATAAGGTCTCTGATGCCACTGGACAGATGAACCTGACCAAGGT
GGCTGACTCCAGCCCCTTTGCCCTCGAACTGCTGATATCTGATGACTGCTTCGTGCTGGACAATGGGCTCTGTGGCAAGA
TCTATATCTGGAAGGGACGAAAAGCGAATGAGAAGGAGCGGCAGGCAGCCCTGCAAGTGGCCGAGGGCTTCATCTCGCGC
ATGCGATACGCCCCGAACACTCAGGTGGAGATTCTGCCCCAGGGCCGTGAGACTCCCATCTTCAAGCAATTTTTCAAGGA
CTGGAAATGA
ATGTACACAGCCATTCCCCAGAGCAGTGGCTCTCCATTTTCGGCCTCAGTGCAGGATCCAGGCCTGCATGTATGGCGGGT
GGAGAAGCTGAAGCCCGTGCCTGTGGCACGGGAGAACCAGGGCGTCTTCTTCTCCGGGGACTCCTACCTAGTGCTGCACA
ATGGCCCAGAAGAGGTTTCCCATCTGCACCTGTGGATAGGCCAGCAATCATCCCGGGATGAGCAGGGGGCCTGTGCCGTG
CTGGCTGTGCACCTCAACACGCTGCTGGGAGAGCGGCCTGTGCAGCACCGTGAGGTGCAGGGCAATGAGTCCGATCTCTT
CATGAGCTACTTCCCACGGGGCCTCAAGTACCAGGAAGGTGGTGTGGAGTCGGCATTTCATAAGACCTCCTCAGGAGCCC
CAGCTGCCATCAAGAAACTCTACCAGGTGAAGGGGAAGAAGAACATTCGTGCCACTGAGCGGGCACTGAGCTGGGACAGC
TTCAACACGGGGGACTGCTTCATCCTGGACCTGGGCCAGAACATCTTCGCCTGGTGTGGTGGCAAGTCCAACATCCTGGA
ACGAAACAAGGCGAGAGACCTGGCCCTGGCCATCCGGGACAGTGAGCGACAGGGCAAGGCCCAGGTGGAGATTGTCACTG
ATGGGGAGGAGCCTGCTGAGATGATCCAGGGTCCTGGGCCCCAAGCTGCTCTGAAGGAGGGCAACCCGGAGGAAGACCTC
ACAGCTGACCAGACAAATTCCCAAGCCGCAGCTCTGTATAAGGTCTCTGATGCCACTGGACAGATGAACCTGACCAAGGT
GGCTGACTCCAGCCCCTTTGCCCTCGAACTGCTGATATCTGATGACTGCTTCGTGCTGGACAATGGGCTCTGTGGCAAGA
TCTATATCTGGAAGGGACGAAAAGCGAATGAGAAGGAGCGGCAGGCAGCCCTGCAAGTGGCCGAGGGCTTCATCTCGCGC
ATGCGATACGCCCCGAACACTCAGGTGGAGATTCTGCCCCAGGGCCGTGAGACTCCCATCTTCAAGCAATTTTTCAAGGA
CTGGAAATGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP051959_spleen | 45 .55 RPM |
| SRP051959_skeletal_muscle | 2 .36 RPM |
| SRP051959_lymph_node | 14 .31 RPM |
| SRP051959_lung | 14 .82 RPM |
| SRP051959_liver | 5 .18 RPM |
| SRP051959_kidney | 6 .32 RPM |
| SRP051959_heart | 5 .40 RPM |
| SRP051959_colon | 36 .70 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Macropus eugenii | ENSMEUG00000013559 | ortholog_one2one | 1 retrogene | |
| Mus musculus | ENSMUSG00000056737 | ortholog_one2one | 1 retrogene | |
| Otolemur garnettii | ENSOGAG00000001084 | ortholog_one2one | 1 retrogene | |
| Rattus norvegicus | ENSRNOG00000013668 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_cjac_459 | 87.54 | 96.25 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_cjac_3816 | 86.14 | 96.54 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSCJAG00000019705 retrocopies