Parental gene: | SIRT5, ENSCJAG00000019802 |
| Aliases: | None |
| Description: | sirtuin 5 [Source:HGNC Symbol;Acc:14933] |
| Organism: | Marmoset (Callithrix jacchus) |
| Coordinates: | 4:15073833..15107678(-) |
>ENSCJAG00000019802
ATGCGACCTCTCCAGATTGTCCCAAGTCGATTGATTTCCCAGCTGTACTGTGGCCTGAAGCCTGAAGCCTCCGCACAAAA
CCGGATTTGCCTGAAAATGGCTCGGCCAAGTTCAAGTATGGCAGATTTTCGGAAGTGTTTTGCAAAATCAAAGCACATAG
TCATCATCTCAGGGGCCGGTGTTAGTGTGGAAAGTGGCGTTCCGACTTTCAGAGGAGCTGGAGGTTATTGGAGAAAATGG
CAAGCCCAGGACCTGGCGACTCCCCTGGCCTTTTCCCACAACCCGTCCCGGGTGTGGGAGTTCTACCACTACCGGCGGGA
GGTCATGGTGAGCAAGGAGCCCAACGCCGGGCACCGTGCCATAGCAGAGTGTGAGGCCCGGCTGGGCAAGCAGGGCCGGC
GAGTCATGGTCATCACCCAGAACATCGATGAACTGCACCGCAAGGCTGGCACCAAAAACCTTCTGGAGATCCATGGTGAG
CTTATTGAAACTCGATGTACCTCTTGTGGAGTTGTGGCTGAGAATTACAGGAGTCCAATTGTCTCAGCTTTATCAGGAAG
AGGTGCTCCAGAACCTGGAACTCAAGATGCCAACATCCCAGTTGAGAAACTTCCCCGGTGTGAAGAGGCAGACTGCGGGG
GCTTGCTACGACCTCACGTCGTGTGGTTTGGAGAAAACCTGGATCCTGCCATTCTGGAGGAGGTTGATGGAGAGCTCGCA
CACTGTGACTTATGTCTAGTGGTGGGCACTTCCTCTGTGGTGTACCCAGCAGCCATGTTTGCTCCCCAGGTGGCTGCGAG
GGGCGTGCCAGTGGCTGAATTTAACATGGAGACCACCCCAGCTACGAACAGATTCAGGTTTCATTTCCAGGGACCCTGTG
GAACGACTCTTCCTGAAGCCCTTGCCCCTCATGAAAATGAAACTATTTCTTAA
ATGCGACCTCTCCAGATTGTCCCAAGTCGATTGATTTCCCAGCTGTACTGTGGCCTGAAGCCTGAAGCCTCCGCACAAAA
CCGGATTTGCCTGAAAATGGCTCGGCCAAGTTCAAGTATGGCAGATTTTCGGAAGTGTTTTGCAAAATCAAAGCACATAG
TCATCATCTCAGGGGCCGGTGTTAGTGTGGAAAGTGGCGTTCCGACTTTCAGAGGAGCTGGAGGTTATTGGAGAAAATGG
CAAGCCCAGGACCTGGCGACTCCCCTGGCCTTTTCCCACAACCCGTCCCGGGTGTGGGAGTTCTACCACTACCGGCGGGA
GGTCATGGTGAGCAAGGAGCCCAACGCCGGGCACCGTGCCATAGCAGAGTGTGAGGCCCGGCTGGGCAAGCAGGGCCGGC
GAGTCATGGTCATCACCCAGAACATCGATGAACTGCACCGCAAGGCTGGCACCAAAAACCTTCTGGAGATCCATGGTGAG
CTTATTGAAACTCGATGTACCTCTTGTGGAGTTGTGGCTGAGAATTACAGGAGTCCAATTGTCTCAGCTTTATCAGGAAG
AGGTGCTCCAGAACCTGGAACTCAAGATGCCAACATCCCAGTTGAGAAACTTCCCCGGTGTGAAGAGGCAGACTGCGGGG
GCTTGCTACGACCTCACGTCGTGTGGTTTGGAGAAAACCTGGATCCTGCCATTCTGGAGGAGGTTGATGGAGAGCTCGCA
CACTGTGACTTATGTCTAGTGGTGGGCACTTCCTCTGTGGTGTACCCAGCAGCCATGTTTGCTCCCCAGGTGGCTGCGAG
GGGCGTGCCAGTGGCTGAATTTAACATGGAGACCACCCCAGCTACGAACAGATTCAGGTTTCATTTCCAGGGACCCTGTG
GAACGACTCTTCCTGAAGCCCTTGCCCCTCATGAAAATGAAACTATTTCTTAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP051959_spleen | 1 .37 RPM |
| SRP051959_skeletal_muscle | 1 .27 RPM |
| SRP051959_lymph_node | 0 .55 RPM |
| SRP051959_lung | 1 .45 RPM |
| SRP051959_liver | 2 .45 RPM |
| SRP051959_kidney | 1 .62 RPM |
| SRP051959_heart | 1 .70 RPM |
| SRP051959_colon | 1 .69 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Erinaceus europaeus | ENSEEUG00000005650 | ortholog_one2one | 1 retrogene | |
| Homo sapiens | ENSG00000124523 | ortholog_one2one | 1 retrogene | |
| Macropus eugenii | ENSMEUG00000008671 | ortholog_one2one | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000000843 | ortholog_one2one | 1 retrogene | |
| Pan troglodytes | ENSPTRG00000017736 | ortholog_one2one | 1 retrogene | |
| Tursiops truncatus | ENSTTRG00000007786 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_cjac_2923 | 58.59 | 62.90 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSCJAG00000019802 retrocopies