Parental gene: | PRAME, ENSCJAG00000020319 |
| Aliases: | None |
| Description: | None |
| Organism: | Marmoset (Callithrix jacchus) |
| Coordinates: | 1:186147310..186169405(-) |
>ENSCJAG00000020319
ATGGAACGAAGGCATTTGCGGACTTACATTCAGAGCCGATTCATCAGCATGAGCATGTGGACGAGCCCACGGAGACTGGT
GGACCTGGCGGGGCAGAGCCTGCTGAAGAATGAGTCCCTGGCCATCGCTGCCCTGGAGTTGCTCCCCAGGGAGCTCTTCC
CGCCGCTCTTCACGGCAGCCTTTGATGGGAGACACAACAAGACCCTGAAGGCCATGGTGCAGGCCTGGCCCTTCACCTGC
CTCCCTCTGGGAGTGCTGATGAAGGGACAGCAGCTTCACGTGGAGACCTTCAAAGCTGTGCTTGATGGAGTTGATGTGCT
GCTTGCCCAGGAGGTTCGCCCCAGGAGGTGGAAACTCAAAGTGCTGGATTTACGAAAGAATTCTCATCAAGACTTTTGGA
CCGTGTGGTCTGGAAAAAGGGTCAGTCTGTGCTCATTTCCAGAGCCAGAAGCAGCTCAGCCCATGAGAAAGAAGCGAAAA
GTAGATGGTTCGAGCACAGAGGCAGAGCAGCGCTTTATTCCAATAGAGGTTCTCGTAGACCTGTCTCTCAAGGAAGGTGC
CTATGATGAATTGTTCATCCACCTGATTGAGATAGTGAGGAGAAAGAAAGACGTACTACACCTGTGCTGTAAGAAGCTGA
AGATTTTTGCAATGCCTGTGCAGAATATCAAGATGATCCTGAAAATGGTGCAGCTGGACTCTATTGAAGATTTGGAAGTG
ACTTGCACCTGGAAACTACCCACCTTGGCGAAATTTTCTCCTCACCTGAGCCAGATGAGTAATCTGCGTAGACTGCTCCT
TGCCCACATCCATCCGGCTTCCTTCATTTCCCCGGAGAAGGAGGAGCAGTTTATCGCCCAGTTCATCTCTCAGTTCCTCA
ATCTCCACTGCCTCGAGGAGCTCTACGTGGACTCTTTATTTTTCCTCAGAGGCCACCTGGATCAGTTGCTCAGATGCATG
ATGAACCCCTTGGAAACCCTCTCAATAACTAACTGCTGGCTTTCAGAAGAAGATGTGACACATCTGTCCCAGAGCCCCAA
CATCAGTCAGCTGAGTGTCCTGAGTCTAAGTGGGGTCATGCTGACCGAGATAAATCCAGAGCTCCTCCAAGCTCTGCTAG
AGAGAACCTCCGCCACCCTCCAGGACCTGGACTTAGATGAGTGTGGAATCGTGGATACTCAGCTCCTTGTTCTTCTGCCT
TCCCTGAGCCACTGCTCCCAGCTTACCACCTTCAGCTTCTGCGGGAATCCCATCTCCATATCTGTCCTGGAGAGCCTCGT
GCACCACATCATCGGGTTGAATAATCTGAGCCACGTGCTGTATCCTGTCCCCGTGGAGAGCTTTGAGGACATCAATGGCA
CCCTCGACCTGGGGAGACTTGCCTATCTGCACACCAGGCTTAGGGAGTTGCTATGCGAATTGGGGCGGCCTGGCATGGTC
TGGCTCAGTGCCACCCCCTGTCCTCACTGTGGTGACAGAACCTTCTATGACCCAGATCCCATCCTGTGCCCCTGTTTCAT
GCCTGCCTAG
ATGGAACGAAGGCATTTGCGGACTTACATTCAGAGCCGATTCATCAGCATGAGCATGTGGACGAGCCCACGGAGACTGGT
GGACCTGGCGGGGCAGAGCCTGCTGAAGAATGAGTCCCTGGCCATCGCTGCCCTGGAGTTGCTCCCCAGGGAGCTCTTCC
CGCCGCTCTTCACGGCAGCCTTTGATGGGAGACACAACAAGACCCTGAAGGCCATGGTGCAGGCCTGGCCCTTCACCTGC
CTCCCTCTGGGAGTGCTGATGAAGGGACAGCAGCTTCACGTGGAGACCTTCAAAGCTGTGCTTGATGGAGTTGATGTGCT
GCTTGCCCAGGAGGTTCGCCCCAGGAGGTGGAAACTCAAAGTGCTGGATTTACGAAAGAATTCTCATCAAGACTTTTGGA
CCGTGTGGTCTGGAAAAAGGGTCAGTCTGTGCTCATTTCCAGAGCCAGAAGCAGCTCAGCCCATGAGAAAGAAGCGAAAA
GTAGATGGTTCGAGCACAGAGGCAGAGCAGCGCTTTATTCCAATAGAGGTTCTCGTAGACCTGTCTCTCAAGGAAGGTGC
CTATGATGAATTGTTCATCCACCTGATTGAGATAGTGAGGAGAAAGAAAGACGTACTACACCTGTGCTGTAAGAAGCTGA
AGATTTTTGCAATGCCTGTGCAGAATATCAAGATGATCCTGAAAATGGTGCAGCTGGACTCTATTGAAGATTTGGAAGTG
ACTTGCACCTGGAAACTACCCACCTTGGCGAAATTTTCTCCTCACCTGAGCCAGATGAGTAATCTGCGTAGACTGCTCCT
TGCCCACATCCATCCGGCTTCCTTCATTTCCCCGGAGAAGGAGGAGCAGTTTATCGCCCAGTTCATCTCTCAGTTCCTCA
ATCTCCACTGCCTCGAGGAGCTCTACGTGGACTCTTTATTTTTCCTCAGAGGCCACCTGGATCAGTTGCTCAGATGCATG
ATGAACCCCTTGGAAACCCTCTCAATAACTAACTGCTGGCTTTCAGAAGAAGATGTGACACATCTGTCCCAGAGCCCCAA
CATCAGTCAGCTGAGTGTCCTGAGTCTAAGTGGGGTCATGCTGACCGAGATAAATCCAGAGCTCCTCCAAGCTCTGCTAG
AGAGAACCTCCGCCACCCTCCAGGACCTGGACTTAGATGAGTGTGGAATCGTGGATACTCAGCTCCTTGTTCTTCTGCCT
TCCCTGAGCCACTGCTCCCAGCTTACCACCTTCAGCTTCTGCGGGAATCCCATCTCCATATCTGTCCTGGAGAGCCTCGT
GCACCACATCATCGGGTTGAATAATCTGAGCCACGTGCTGTATCCTGTCCCCGTGGAGAGCTTTGAGGACATCAATGGCA
CCCTCGACCTGGGGAGACTTGCCTATCTGCACACCAGGCTTAGGGAGTTGCTATGCGAATTGGGGCGGCCTGGCATGGTC
TGGCTCAGTGCCACCCCCTGTCCTCACTGTGGTGACAGAACCTTCTATGACCCAGATCCCATCCTGTGCCCCTGTTTCAT
GCCTGCCTAG
| Library | Parental gene expression (RPM) |
|---|---|
| SRP051959_spleen | 0 .19 RPM |
| SRP051959_skeletal_muscle | 0 .09 RPM |
| SRP051959_lymph_node | 0 .32 RPM |
| SRP051959_lung | 0 .31 RPM |
| SRP051959_liver | 0 .26 RPM |
| SRP051959_kidney | 0 .18 RPM |
| SRP051959_heart | 0 .19 RPM |
| SRP051959_colon | 0 .20 RPM |
No homologs available
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_cjac_1383 | 97.64 | 100.00 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_cjac_2512 | 85.03 | 93.91 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSCJAG00000020319 retrocopies