Parental gene:

NSMCE1, ENSCJAG00000020515

Aliases:None
Description:None
Organism:Marmoset (Callithrix jacchus)
Coordinates:12:26072353..26107470(-)


>ENSCJAG00000020515
ATGCAGGGCAGTGCAAGGAGAACGGGCGTCATGACTGATGTCCACCGGCGCTTCCTCCAGTTGCTGATGACGCATGGCGT
GCTAGAGGAGTGGGACGTGAAGCGCATGCAGAAGCACTGCTACAAGGTCCATGACCGCAATGCCACCGTAGATAAGTTGG
AGGACTTCATCAACAACATAAACAGTGTCTTGGAGTCCTTGTATATTGAGATAAAGAGAGGAGTCACGGAAGATGACGGG
AGACCCATTTATGCGCTGGTGAATCTTGCTACAACTTCAGTTTCCAAAATGGCTACGGATTTTGCAGAGAATGAGCTGGA
TCTGTTTAGAAAGGCCCTGGAACTGATCATTGACTCAGAAAGTGGCTTTGCATCTTCCACAAACATTTTGAACCTGGTTG
ATCAGCTTAAAGGCAAAAAGATGAAGAAGAAGGAAGCGGAGCTGGTGCTGCAGAAGTTTGTCCAAAACAAGTGGCTGATT
GAGAAAGAGGTGGAGAGATCTTTGCACCCAAGAGTGCGTGTGCCTAGCACACAGCACAACCATTGCACACAGGATGGAGC
AGTCAGGATCTGCAATATCTGCCACAGCCTCCTCATCCAGGGTCAAAGCTGCGAGACCTGCGGGATCAGGATGCACTTAC
CCTGCGTGGCCAAGTACTTCCGGTCGAATGCCGAACCGCGCTGCCCTCACTGCAACGACTACTGGCCCCATGAGATCCCA
GAAGTCTTCGACCCTGAGAAGGAGAGGGAGCCTGGTATCTCGAAATCGAACAGAAAGTCCCTGCGGTCCAGGCGGCATTA
G

Library Parental gene expression (RPM)
SRP051959_spleen 3 .74 RPM
SRP051959_skeletal_muscle 6 .16 RPM
SRP051959_lymph_node 4 .31 RPM
SRP051959_lung 4 .28 RPM
SRP051959_liver 9 .27 RPM
SRP051959_kidney 5 .79 RPM
SRP051959_heart 5 .23 RPM
SRP051959_colon 3 .39 RPM



Species Parental gene accession Homology type Retrogenes number
Choloepus hoffmanni ENSCHOG00000011003 ortholog_one2one 2 retrogenes
retro_chof_1394, retro_chof_339,
Dasypus novemcinctus ENSDNOG00000013271 ortholog_one2one 1 retrogene
retro_dnov_641,
Mus musculus ENSMUSG00000030750 ortholog_one2one 2 retrogenes
retro_mmus_1564, retro_mmus_2488,
Ochotona princeps ENSOPRG00000011452 ortholog_one2one 1 retrogene
retro_opri_732,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cjac_2191 88.28 89.85
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Download FASTA sequences of all ENSCJAG00000020515 retrocopies