Parental gene: | FUBP3, ENSCJAG00000020542 |
| Aliases: | None |
| Description: | far upstream element (FUSE) binding protein 3 [Source:HGNC Symbol;Acc:4005] |
| Organism: | Marmoset (Callithrix jacchus) |
| Coordinates: | 1:174697438..174757544(+) |
>ENSCJAG00000020542
ATGGCGGAGCTGGTGCAGGGGCAGAGCGCTCCTGTGGGGATGAAGGCTGAGGGCTTTGTGGATGCCCTGCACCGGGTCCG
GCAGATTGCTGCTAAAATTGATTCAATTCCTCACTTGAATAATTCCACACCTCTAGTGGACCCCTCAGTATATGGATATG
GAGTACAAAAACGGCCCTTGGATGATGGAGTAGGTAACCAGTTAGGGGCCTTGGTACATCAAAGGACAGTAATAACGGAA
GAATTCAAAGTGCCTGACAAAATGGTTGGATTTATTATTGGCAGGGGAGGTGAGCAGATTTCACGGATTCAAGCAGAATC
TGGTTGCAAAATTCAGATTGCTTCAGAGAGTTCTGGGATTCCAGAGAGGCCCTGTGTACTTACCGGAACCCCAGAAAGTA
TTGAACAAGCCAAACGACTCCTGGGGCAGATTGTGGACCGCTGTCGAAATGGACCTGGCTTTCATAATGACATAGACAGC
AACAGCACAATCCAGGAGATTCTCATTCCCGCATCTAAAGTGGGTCTTGTCATCGGCAGAGGAGGGGAAACAATCAAGCA
GTTGCAGGAGCGGACAGGTGTGAAGATGGTCATGATCCAGGACGGCCCATTGCCCACGGGAGCAGACAAGCCTCTTCGTA
TCACTGGAGACCCATTTAAAGTACAGCAAGCAAGAGAAATGGTACTAGAGATTATCCGAGAAAAAGACCAAGCTGACTTT
CGGGGTGTACGCGGTGACTTCAGCTCCCGAATGGGAGGAGGCAGTATAGAGGTGTCTGTGCCTAGGTTTGCTGTGGGGAT
TGTAATAGGAAGAAACGGGGAAATGATCAAAAAGATCCAGAATGATGCTGGTGTGAGGATCCAGTTTAAACCAGACGATG
GGATTAGTCCAGAAAGAGCTGCACAGGTCATGGGCCCTCCCGATCGGTGTCAGCATGCAGCGCACATCATCAACGAGCTG
ATTCTTACAGCCCAGGAAAGAGATGGCTTTGGAGGCCTGGCAGTAGCCAGAGGAAGAGGTCGTGGCCGTGGCGACTGGAG
CGTGGGAGCCCCTGGTGGCGTCCAGGAGATAACATACACAGTGCCAGCTGATAAGTGTGGCCTGGTCATAGGCAAAGGGG
GCGAGAACATCAAAAGCATCAACCAGCAGTCAGGGGCGCATGTGGAGCTCCAGAGGAACCCCCCTCCCAACAGCGACCCC
AACCTTCGGAGATTCACCATCAGGGGGGTTCCCCAGCAGATCGAGGTGGCCAGGCAGCTCATAGACGAGAAAGTTGGCGG
GACCAGCCTTGGAGCACCTGGAGCCTTTGGACAGAGCCCCTTCAGCCAGCCACCTGCCCCACCTCATCAAAACACCTTTC
CTCCAAGGAGCTCTGGGTGCTTCCCAAACATGGCTGCCAAGGTGAACGGAAACCCCCACAGCACCCCCGTGAGTGGTCCT
CCGGCCTTTCTGACCCAGGGCTGGGGCAGCACCTACCAGGCATGGCAGCAGCCCACACAGCAGGTCCCAAGCCAGCAGAG
CCAGCCGCAGAGCAGCCAGCCCAGCTACAGCAAGGCCTGGGAAGACTATTACAAAAAGCAGAGTCACGCCGCCAGCACGG
CTCCTCAGGCCAGCTCCCCGCCGGACTACACAATGGCCTGGGCGGAATATTACAGACAGCAGGTCGCTTTCTACGGGCAG
ACATTAGGACAGGCACAGGCCCATAGCCAGGAGCAGTAG
ATGGCGGAGCTGGTGCAGGGGCAGAGCGCTCCTGTGGGGATGAAGGCTGAGGGCTTTGTGGATGCCCTGCACCGGGTCCG
GCAGATTGCTGCTAAAATTGATTCAATTCCTCACTTGAATAATTCCACACCTCTAGTGGACCCCTCAGTATATGGATATG
GAGTACAAAAACGGCCCTTGGATGATGGAGTAGGTAACCAGTTAGGGGCCTTGGTACATCAAAGGACAGTAATAACGGAA
GAATTCAAAGTGCCTGACAAAATGGTTGGATTTATTATTGGCAGGGGAGGTGAGCAGATTTCACGGATTCAAGCAGAATC
TGGTTGCAAAATTCAGATTGCTTCAGAGAGTTCTGGGATTCCAGAGAGGCCCTGTGTACTTACCGGAACCCCAGAAAGTA
TTGAACAAGCCAAACGACTCCTGGGGCAGATTGTGGACCGCTGTCGAAATGGACCTGGCTTTCATAATGACATAGACAGC
AACAGCACAATCCAGGAGATTCTCATTCCCGCATCTAAAGTGGGTCTTGTCATCGGCAGAGGAGGGGAAACAATCAAGCA
GTTGCAGGAGCGGACAGGTGTGAAGATGGTCATGATCCAGGACGGCCCATTGCCCACGGGAGCAGACAAGCCTCTTCGTA
TCACTGGAGACCCATTTAAAGTACAGCAAGCAAGAGAAATGGTACTAGAGATTATCCGAGAAAAAGACCAAGCTGACTTT
CGGGGTGTACGCGGTGACTTCAGCTCCCGAATGGGAGGAGGCAGTATAGAGGTGTCTGTGCCTAGGTTTGCTGTGGGGAT
TGTAATAGGAAGAAACGGGGAAATGATCAAAAAGATCCAGAATGATGCTGGTGTGAGGATCCAGTTTAAACCAGACGATG
GGATTAGTCCAGAAAGAGCTGCACAGGTCATGGGCCCTCCCGATCGGTGTCAGCATGCAGCGCACATCATCAACGAGCTG
ATTCTTACAGCCCAGGAAAGAGATGGCTTTGGAGGCCTGGCAGTAGCCAGAGGAAGAGGTCGTGGCCGTGGCGACTGGAG
CGTGGGAGCCCCTGGTGGCGTCCAGGAGATAACATACACAGTGCCAGCTGATAAGTGTGGCCTGGTCATAGGCAAAGGGG
GCGAGAACATCAAAAGCATCAACCAGCAGTCAGGGGCGCATGTGGAGCTCCAGAGGAACCCCCCTCCCAACAGCGACCCC
AACCTTCGGAGATTCACCATCAGGGGGGTTCCCCAGCAGATCGAGGTGGCCAGGCAGCTCATAGACGAGAAAGTTGGCGG
GACCAGCCTTGGAGCACCTGGAGCCTTTGGACAGAGCCCCTTCAGCCAGCCACCTGCCCCACCTCATCAAAACACCTTTC
CTCCAAGGAGCTCTGGGTGCTTCCCAAACATGGCTGCCAAGGTGAACGGAAACCCCCACAGCACCCCCGTGAGTGGTCCT
CCGGCCTTTCTGACCCAGGGCTGGGGCAGCACCTACCAGGCATGGCAGCAGCCCACACAGCAGGTCCCAAGCCAGCAGAG
CCAGCCGCAGAGCAGCCAGCCCAGCTACAGCAAGGCCTGGGAAGACTATTACAAAAAGCAGAGTCACGCCGCCAGCACGG
CTCCTCAGGCCAGCTCCCCGCCGGACTACACAATGGCCTGGGCGGAATATTACAGACAGCAGGTCGCTTTCTACGGGCAG
ACATTAGGACAGGCACAGGCCCATAGCCAGGAGCAGTAG
| Library | Parental gene expression (RPM) |
|---|---|
| SRP051959_spleen | 20 .06 RPM |
| SRP051959_skeletal_muscle | 7 .40 RPM |
| SRP051959_lymph_node | 17 .99 RPM |
| SRP051959_lung | 23 .33 RPM |
| SRP051959_liver | 31 .34 RPM |
| SRP051959_kidney | 22 .56 RPM |
| SRP051959_heart | 14 .54 RPM |
| SRP051959_colon | 19 .97 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Callithrix jacchus | ENSCJAG00000016627 | within_species_paralog | 1 retrogene | |
| Microcebus murinus | ENSMICG00000015452 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_cjac_3887 | 91.96 | 69.06 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSCJAG00000020542 retrocopies