Parental gene:

METTL9, ENSCJAG00000020564

Aliases:None
Description:methyltransferase like 9 [Source:HGNC Symbol;Acc:24586]
Organism:Marmoset (Callithrix jacchus)
Coordinates:12:21308476..21354151(+)


>ENSCJAG00000020564
ATGAGACTGCTGGTGGGCTGGCTGTGCCTGAGCCTGGCGTCCGTGTGGCTGGCGCGGAGGATGTGGACGCTGCGGAGCCC
GCTCACCCGCTCCCTGTACGTGAACATGACGAGCGGCCCGGGTGGGCCGGCGGCGGCCGCGGGCGGCGGGAAGGAGAACC
ACCAGTGGTATGTGTGCAACAGAGAGAAATTATGCGAATCACTCCAGGCTGTCTTTGTTCAGAGTTACCTTGATCAAGGA
ACACAGATCTTCTTAAACAACAGCATTGAGAAATCTGGCTGGCTATTTATCCAATTATATCATTCTTTTGTGTCATCTGT
TTTTAGCCTGTTTATGTCTAGAACATCTATCAATGGGTTGCTAGGAAGAGGCTCAATGTTTGTGTTTTCACCAGATCAGT
TTCAGAGACTGCTTAAAATTAATCCAGACTGGAAAACCCACAGACTTCTTGATTTAGGTGCTGGAGATGGAGAAGTCACA
AAAATCATGAGCCCTCATTTTGAAGAAATCTATGCCACTGAGCTTTCTGAAACTATGATATGGCAGCTTCAGAAGAAAAA
ATACAGAGTGCTTGGTATAAATGAATGGCAGAATACAGGGTTCCAGTATGATGTCATTAGCTGCCTGAACTTGCTGGACC
GCTGTGATCAGCCCCTGACTTTGTTAAAGGATATCAGAAGTGTCTTGGAGCCAACTAGAGGCAGGGTCATCCTTGCCCTG
GTCCTCCCCTTTCATCCCTATGTGGAAAACGTAGGTGGCAAGTGGGAGAAACCATCAGAAATTTTGGAAATCAAGGGACA
GAACTGGGAAGAACAAGTGAATAGTCTGCCTGAAGTTTTCAGAAAAGCCGGTTTTGTTATTGAAGCTTTCACCAGACTGC
CATACCTGTGTGAAGGTGACATGTATAATGACTACTACGTTCTGGATGACGCTGTCTTTGTTCTCAAACCAGTATAA

Library Parental gene expression (RPM)
SRP051959_spleen 20 .82 RPM
SRP051959_skeletal_muscle 13 .32 RPM
SRP051959_lymph_node 19 .82 RPM
SRP051959_lung 21 .51 RPM
SRP051959_liver 6 .97 RPM
SRP051959_kidney 57 .04 RPM
SRP051959_heart 14 .19 RPM
SRP051959_colon 21 .46 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000003533 possible_ortholog 2 retrogenes
retro_amel_402, retro_amel_704,
Canis familiaris ENSCAFG00000017710 possible_ortholog 1 retrogene
retro_cfam_1875,
Mustela putorius furo ENSMPUG00000016801 ortholog_one2many 2 retrogenes
retro_mputfur_1323, retro_mputfur_1610,
Oryctolagus cuniculus ENSOCUG00000004285 ortholog_one2one 1 retrogene
retro_ocun_754,
Otolemur garnettii ENSOGAG00000008169 ortholog_one2one 3 retrogenes
retro_ogar_1745, retro_ogar_307, retro_ogar_588,
Rattus norvegicus ENSRNOG00000025940 ortholog_one2many 1 retrogene
retro_rnor_2623,
Sus scrofa ENSSSCG00000030373 possible_ortholog 1 retrogene
retro_sscr_441,
Tupaia belangeri ENSTBEG00000003816 possible_ortholog 2 retrogenes
retro_tbel_1726, retro_tbel_2084,
Tursiops truncatus ENSTTRG00000015624 possible_ortholog 4 retrogenes
retro_ttru_1100, retro_ttru_1466, retro_ttru_163, retro_ttru_467,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cjac_4083 95.64 86.48
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Download FASTA sequences of all ENSCJAG00000020564 retrocopies