Parental gene: | RAD51, ENSCJAG00000020821 |
| Aliases: | None |
| Description: | RAD51 recombinase [Source:HGNC Symbol;Acc:9817] |
| Organism: | Marmoset (Callithrix jacchus) |
| Coordinates: | 10:35176781..35238256(-) |
>ENSCJAG00000020821
ATGGCAATGCAGATGCAGCTTGAAGCAAATGCAGATACTTCAGTGGAAGAAGAAAGCTTTGGCCCACAACCTGTTTCACG
GTTAGAGCAGTGTGGCATAAATGCCAATGATGTGAAAAAATTGGAAGAAGCTGGATTCCATACTGTGGAGGCTGTTGCCT
ATGCACCAAAGAAGGAGCTAATAAATATTAAGGGAATTAGTGAAGCCAAAGCTGATAAAATTCTGACAGAGTCTGACCCT
TTGCCCAGGCTAGAGTGCAATGGCATGATCATAGCTCATTGCAGCTTCAAACTTAGTAGTTCAAGTGATTCTCCTGCCTC
AGCCTCCCAAGTAGCTGGGACTATAGGCGGTGGTGGAATTGAGACTGGCTCTATCACAGAAATGTTTGGAGAATTCCGAA
CTGGGAAGACCCAGATCTGTCATACACTGGCTGTCACCTGCCAGCTTCCCATTGACCGGGGCGGAGGTGAAGGAAAGGCC
ATGTACATTGACACCGAGGGTACCTTTAGGCCAGAACGGCTGCTAGCAGTGGCTGAGAGGTATGGTCTGTCTGGCAGTGA
TGTCCTGGATAATGTAGCATATGCTCGAGCATTCAACACAGACCACCAGACCCAGCTCCTTTATCAAGCATCAGCCATGA
TGGTAGAATCTAGGTATGCACTGCTTATTGTAGACAGTGCCACCGCCCTTTACAGAACAGACTACTCGGGTCGAGGTGAG
CTTTCAGCCAGGCAGATGCACTTGGCCAGGTTTCTGCGGATGCTTCTGCGACTTGCTGATGAGTTTGGTGTAGCAGTGGT
AATCACTAATCAGGTGGTAGCCCAGGTGGATGGAGCAGCCATGTTTGCGGCCGATCCCAAAAAACCTATTGGAGGAAACA
TCATCGCCCATGCATCAACAACCAGATTGTATCTGAGGAAAGGAAGAGGGGAAACCAGAATCTGCAAAATCTACGACTCT
CCCTGTCTTCCTGAAGCTGAAGCTATGTTTGCCATCAATGCAGATGGAGTGGGAGATGCCAAAGACTGA
ATGGCAATGCAGATGCAGCTTGAAGCAAATGCAGATACTTCAGTGGAAGAAGAAAGCTTTGGCCCACAACCTGTTTCACG
GTTAGAGCAGTGTGGCATAAATGCCAATGATGTGAAAAAATTGGAAGAAGCTGGATTCCATACTGTGGAGGCTGTTGCCT
ATGCACCAAAGAAGGAGCTAATAAATATTAAGGGAATTAGTGAAGCCAAAGCTGATAAAATTCTGACAGAGTCTGACCCT
TTGCCCAGGCTAGAGTGCAATGGCATGATCATAGCTCATTGCAGCTTCAAACTTAGTAGTTCAAGTGATTCTCCTGCCTC
AGCCTCCCAAGTAGCTGGGACTATAGGCGGTGGTGGAATTGAGACTGGCTCTATCACAGAAATGTTTGGAGAATTCCGAA
CTGGGAAGACCCAGATCTGTCATACACTGGCTGTCACCTGCCAGCTTCCCATTGACCGGGGCGGAGGTGAAGGAAAGGCC
ATGTACATTGACACCGAGGGTACCTTTAGGCCAGAACGGCTGCTAGCAGTGGCTGAGAGGTATGGTCTGTCTGGCAGTGA
TGTCCTGGATAATGTAGCATATGCTCGAGCATTCAACACAGACCACCAGACCCAGCTCCTTTATCAAGCATCAGCCATGA
TGGTAGAATCTAGGTATGCACTGCTTATTGTAGACAGTGCCACCGCCCTTTACAGAACAGACTACTCGGGTCGAGGTGAG
CTTTCAGCCAGGCAGATGCACTTGGCCAGGTTTCTGCGGATGCTTCTGCGACTTGCTGATGAGTTTGGTGTAGCAGTGGT
AATCACTAATCAGGTGGTAGCCCAGGTGGATGGAGCAGCCATGTTTGCGGCCGATCCCAAAAAACCTATTGGAGGAAACA
TCATCGCCCATGCATCAACAACCAGATTGTATCTGAGGAAAGGAAGAGGGGAAACCAGAATCTGCAAAATCTACGACTCT
CCCTGTCTTCCTGAAGCTGAAGCTATGTTTGCCATCAATGCAGATGGAGTGGGAGATGCCAAAGACTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP051959_spleen | 1 .13 RPM |
| SRP051959_skeletal_muscle | 0 .20 RPM |
| SRP051959_lymph_node | 1 .14 RPM |
| SRP051959_lung | 0 .59 RPM |
| SRP051959_liver | 0 .37 RPM |
| SRP051959_kidney | 0 .27 RPM |
| SRP051959_heart | 0 .32 RPM |
| SRP051959_colon | 2 .53 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Ornithorhynchus anatinus | ENSOANG00000028534 | possible_ortholog | 1 retrogene | |
| Otolemur garnettii | ENSOGAG00000031397 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_cjac_430 | 77.14 | 60.06 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_cjac_2811 | 96.15 | 68.93 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSCJAG00000020821 retrocopies