Parental gene: | RACGAP1, ENSCJAG00000021058 |
| Aliases: | None |
| Description: | Rac GTPase activating protein 1 [Source:HGNC Symbol;Acc:9804] |
| Organism: | Marmoset (Callithrix jacchus) |
| Coordinates: | 9:38774440..38810986(-) |
>ENSCJAG00000021058
ATGGATACTATGATGCTGAATATGCGGAATCTGTTTGAGCAGCTTGTGCGCCGGGCAGAGATTCTCAGTGAAGGAAATGA
ACTCCAATTTATCCAGTTGGCGAAGGACTTTGAGGACATCCGTAAAAAGTGGCAGAGGACTGACCATGAGCTGGGGAAAT
ACAAGGATCTTTTGATGAAAGCAGAAACTGAGCGAAGTGCTCTGGATGTTAAGCTGAAGCATGCACGTAATCAGGTGGAT
GTAGAGATCAAACGGAGACAGAGAGCTGAGGCTGACTGTGAAAAGCTGGAACGACAGATTCAGCTGATTCGAGAGATGCT
CATGTGTGACACATCTGGCAGCATTCAACTAAGTGAGGAGCAAAAATCAGCTCTGGCTTTTCTCAACAGAGGCCAACCAT
CCAGCAGCAATGCTGGGAACAAAAGACTATCAACCATTGATGAATCTGGTTCCATTTTATCAGATATCAGCTTTGACAAG
ACTGATGAATCACTGGATTGGGATTCTTCTTTGGTGAAGACTTTCAAACTGAAGAAGAGAGAAAAGAGGCGCTCTAGTAG
CCGACAGTTTGTTGATGGTCCCCCTGGACCTGTAAAGAAAACTCGTTCCATTGGCTCCACCGCAGACCAGGGGAATGAAT
CCATAGTTGCAAAAACTACAGTGACTGTTCCCAATGATGGCGGGCCCATCGAAGCTGTGTCCACTATTGAGACTGTGCCA
TGTTGGACCAAGAGCCAAAGGAAAACAGGTACTTTACAACCTTGGAACAGTGACTCCACCCTGAACAGCAGGCAACTAGA
GCCAAGAACTGAGACAGACAATGTGGGCACACCACAGAATAATGGAGGGATGCGCCTGCATGACTTTGTCTCTAAGACGA
ATATAGCACCTAAATTTTTTAAATGTTTTGCCTTTGTACCATTTGATGTCCTTATAAAAATCCAAGCAGNATCTCTGAAG
TGTCGAGACTGTCGTGTGGTCTCTCATCCAGAATGTCGGGACCGCTGTCCCCCTTGCAATCCTACCCTGATAGGAACACC
TGTCAAGATTGGAGAGGGAATGCTGGCAGACTTTGTGTCCCAGACCTCTCCAATGATCCCCTCCATTGTTGTGCATTGTG
TAAATGAGATTGAGCAGAGAGGTCTGACAGAGACAGGCCTGTATAGGATCTCTGGCTGTGACCGCACAGTAAAAGAGCTG
AAAGAGAAATTCCTCAGAGTGAAAACTGTACCCCTCCTCAGCAAAGTGGATGATATCCATGCTATCTGTAGCCTTCTAAA
AGACTTTCTTAGAAACCTCAAAGAACCTCTTCTGACCTTTCGCCTAAACAAAGCCTTTATGGAAGCAGCAGAAATCGCAG
ATGAAGACAACAGCATAGCTGCCATGTACCAGGCTGTTGGTGAACTGCCCCAGGCCAACAGGGACACATTAGCTTTCCTC
ATGATTCACATGCAGAGAGTGGCACAGAGTCCACATACTAAAATGGATGTTGCCAATCTGGCTAAAGTCTTTGGCCCTAC
AATAGTGGCCCATGCTGTGCCCAATCCAGACCCAGTGACAATGTTACAGGACATCAAGCGTCAACCCAAGGTGGTCGAGC
GCCTGCTTTCCTTGCCCCTGGAGTATTGGAGTCAGTTCATGATGGTGGAACAAGAGAACATTGACCCTCTACATGTCATT
GAAAACTCAAACGCCTTTTCAACGCCACAGACACCAGATATTAAAGTGAGTTTACTGGGACCTGTGACCACTCCTGAGCA
TCAGCTTCTGAAGACTCCTTCATCTAGTTCCCTGTCACAGAGAGTTCGTTCCACCCTCACCAAGAACACTCCCAGATTTG
GGAGCAAAAGCAAATCTGCCACCAACCTAGGACGACAAGGCAACTTTTTTGCTTCTCCAATGCTCAAGTGA
ATGGATACTATGATGCTGAATATGCGGAATCTGTTTGAGCAGCTTGTGCGCCGGGCAGAGATTCTCAGTGAAGGAAATGA
ACTCCAATTTATCCAGTTGGCGAAGGACTTTGAGGACATCCGTAAAAAGTGGCAGAGGACTGACCATGAGCTGGGGAAAT
ACAAGGATCTTTTGATGAAAGCAGAAACTGAGCGAAGTGCTCTGGATGTTAAGCTGAAGCATGCACGTAATCAGGTGGAT
GTAGAGATCAAACGGAGACAGAGAGCTGAGGCTGACTGTGAAAAGCTGGAACGACAGATTCAGCTGATTCGAGAGATGCT
CATGTGTGACACATCTGGCAGCATTCAACTAAGTGAGGAGCAAAAATCAGCTCTGGCTTTTCTCAACAGAGGCCAACCAT
CCAGCAGCAATGCTGGGAACAAAAGACTATCAACCATTGATGAATCTGGTTCCATTTTATCAGATATCAGCTTTGACAAG
ACTGATGAATCACTGGATTGGGATTCTTCTTTGGTGAAGACTTTCAAACTGAAGAAGAGAGAAAAGAGGCGCTCTAGTAG
CCGACAGTTTGTTGATGGTCCCCCTGGACCTGTAAAGAAAACTCGTTCCATTGGCTCCACCGCAGACCAGGGGAATGAAT
CCATAGTTGCAAAAACTACAGTGACTGTTCCCAATGATGGCGGGCCCATCGAAGCTGTGTCCACTATTGAGACTGTGCCA
TGTTGGACCAAGAGCCAAAGGAAAACAGGTACTTTACAACCTTGGAACAGTGACTCCACCCTGAACAGCAGGCAACTAGA
GCCAAGAACTGAGACAGACAATGTGGGCACACCACAGAATAATGGAGGGATGCGCCTGCATGACTTTGTCTCTAAGACGA
ATATAGCACCTAAATTTTTTAAATGTTTTGCCTTTGTACCATTTGATGTCCTTATAAAAATCCAAGCAGNATCTCTGAAG
TGTCGAGACTGTCGTGTGGTCTCTCATCCAGAATGTCGGGACCGCTGTCCCCCTTGCAATCCTACCCTGATAGGAACACC
TGTCAAGATTGGAGAGGGAATGCTGGCAGACTTTGTGTCCCAGACCTCTCCAATGATCCCCTCCATTGTTGTGCATTGTG
TAAATGAGATTGAGCAGAGAGGTCTGACAGAGACAGGCCTGTATAGGATCTCTGGCTGTGACCGCACAGTAAAAGAGCTG
AAAGAGAAATTCCTCAGAGTGAAAACTGTACCCCTCCTCAGCAAAGTGGATGATATCCATGCTATCTGTAGCCTTCTAAA
AGACTTTCTTAGAAACCTCAAAGAACCTCTTCTGACCTTTCGCCTAAACAAAGCCTTTATGGAAGCAGCAGAAATCGCAG
ATGAAGACAACAGCATAGCTGCCATGTACCAGGCTGTTGGTGAACTGCCCCAGGCCAACAGGGACACATTAGCTTTCCTC
ATGATTCACATGCAGAGAGTGGCACAGAGTCCACATACTAAAATGGATGTTGCCAATCTGGCTAAAGTCTTTGGCCCTAC
AATAGTGGCCCATGCTGTGCCCAATCCAGACCCAGTGACAATGTTACAGGACATCAAGCGTCAACCCAAGGTGGTCGAGC
GCCTGCTTTCCTTGCCCCTGGAGTATTGGAGTCAGTTCATGATGGTGGAACAAGAGAACATTGACCCTCTACATGTCATT
GAAAACTCAAACGCCTTTTCAACGCCACAGACACCAGATATTAAAGTGAGTTTACTGGGACCTGTGACCACTCCTGAGCA
TCAGCTTCTGAAGACTCCTTCATCTAGTTCCCTGTCACAGAGAGTTCGTTCCACCCTCACCAAGAACACTCCCAGATTTG
GGAGCAAAAGCAAATCTGCCACCAACCTAGGACGACAAGGCAACTTTTTTGCTTCTCCAATGCTCAAGTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP051959_spleen | 9 .94 RPM |
| SRP051959_skeletal_muscle | 1 .59 RPM |
| SRP051959_lymph_node | 17 .05 RPM |
| SRP051959_lung | 8 .83 RPM |
| SRP051959_liver | 1 .49 RPM |
| SRP051959_kidney | 2 .53 RPM |
| SRP051959_heart | 2 .32 RPM |
| SRP051959_colon | 19 .28 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Choloepus hoffmanni | ENSCHOG00000001701 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_cjac_837 | 80.90 | 52.36 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_cjac_1325 | 89.22 | 52.04 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSCJAG00000021058 retrocopies