Parental gene: | KLF5, ENSCJAG00000021146 |
| Aliases: | None |
| Description: | None |
| Organism: | Marmoset (Callithrix jacchus) |
| Coordinates: | 1:41590716..41612539(-) |
>ENSCJAG00000021146
ATGGCTACGCGGGTGCTGAGCATGAGCGCCCGCCTGGGACCCGTGCCCCAGCCGCCGGCGCCACAGGACGAGCCCGTGTT
CGCGCAGCTCAAGCCAGTGCTGGGCGCCGCGAACCCGGCCCGCGACGCGGCGCTCTTCCCCGGCGAGGAGCTGAAGCACC
CACACCACCGCCCGCCGGCGCAGCCCGCGCCCCCACAGGCCCCACAGCCGGCCCAGCAGCCCGCAGCCGGTCCGCGGCTG
CCTCCCGAGGAGCTGGTCCAGACAAGATGTGAAATGGAGAAGTATCTGACACCTCAGCTTCCTCCAGTTCCTATAATTCC
AGAGCATAAAAAGTATAGACGAGACAGTGCCTCAGTCGTAGACCAGTTCTTCACTGACACTGAAGGGTTACCTTACAGTA
TCAACATGAACGTGTTCCTCCCTGACATCACTCACCTGAGAACTGGCCTCTACAAATCCCAGAGACCCTGCGTCACACAC
ATCAAGACAGAACCTGTTGCCATTTTCAGCCACCAGAGTGAAACGACTGCCCCTCCTCCGGCCCCAACCCAGGCCCTCCC
TGAGTTCACCAGTATATTCAGCTCACACCAGACCGCAGCTCCAGAGGTGAACAATATTTTCATCAAACAAGAACTTCCTA
CACCAGATCTTCATCTTTCTGTCCCTCCCCAGCAGGGCCACCTGTACCAGCTACTGAATACACCGGATCTAGATATGCCC
AGTTCTACAAACCAGACAGCAGCAATGGACACTCTTAATGTTTCTATGTCAGCTGCCATGGCAGGCCTTAACACACACAC
CTCTGCTGTTCCGCAGACTGCAGTGAAACAGTTCCAGGCCATGCCCCCTTGCACATACACAATGCCAAGTCAGTTTCTTC
CACAACAGGCCACTTACTTTCCCCCGTCACCACCAAGCTCAGAGCCTGGAAGTCCAGATAGACAAGCAGAGATGCTCCAG
AATTTAACCCCACCTCCATCCTATGCTGCTACAATTGCTTCTAAACTGGCAATTCACAATCCAAATTTACCCACCACCCT
GCCAGTTAACTCACAAAACATCCAACCTGTCAGATACAATAGAAGGAGTAACCCTGATTTGGAGAAACGACGCATTCACT
ACTGCGATTACCCTGGTTGCACAAAAGTTTATACAAAGTCTTCTCATTTAAAAGCTCACCTGAGGACTCACACTGGTGAA
AAGCCATACAAGTGCACCTGGGAAGGCTGCGACTGGAGGTTCGCGAGATCCGATGAGCTGACCCGCCACTACCGGAAGCA
CACGGGCGCCAAGCCCTTTCAGTGCGGGGTGTGCAACCGCAGCTTCTCACGCTCCGACCACCTGGCCCTGCACATGAAGA
GGCACCAGAACTGA
ATGGCTACGCGGGTGCTGAGCATGAGCGCCCGCCTGGGACCCGTGCCCCAGCCGCCGGCGCCACAGGACGAGCCCGTGTT
CGCGCAGCTCAAGCCAGTGCTGGGCGCCGCGAACCCGGCCCGCGACGCGGCGCTCTTCCCCGGCGAGGAGCTGAAGCACC
CACACCACCGCCCGCCGGCGCAGCCCGCGCCCCCACAGGCCCCACAGCCGGCCCAGCAGCCCGCAGCCGGTCCGCGGCTG
CCTCCCGAGGAGCTGGTCCAGACAAGATGTGAAATGGAGAAGTATCTGACACCTCAGCTTCCTCCAGTTCCTATAATTCC
AGAGCATAAAAAGTATAGACGAGACAGTGCCTCAGTCGTAGACCAGTTCTTCACTGACACTGAAGGGTTACCTTACAGTA
TCAACATGAACGTGTTCCTCCCTGACATCACTCACCTGAGAACTGGCCTCTACAAATCCCAGAGACCCTGCGTCACACAC
ATCAAGACAGAACCTGTTGCCATTTTCAGCCACCAGAGTGAAACGACTGCCCCTCCTCCGGCCCCAACCCAGGCCCTCCC
TGAGTTCACCAGTATATTCAGCTCACACCAGACCGCAGCTCCAGAGGTGAACAATATTTTCATCAAACAAGAACTTCCTA
CACCAGATCTTCATCTTTCTGTCCCTCCCCAGCAGGGCCACCTGTACCAGCTACTGAATACACCGGATCTAGATATGCCC
AGTTCTACAAACCAGACAGCAGCAATGGACACTCTTAATGTTTCTATGTCAGCTGCCATGGCAGGCCTTAACACACACAC
CTCTGCTGTTCCGCAGACTGCAGTGAAACAGTTCCAGGCCATGCCCCCTTGCACATACACAATGCCAAGTCAGTTTCTTC
CACAACAGGCCACTTACTTTCCCCCGTCACCACCAAGCTCAGAGCCTGGAAGTCCAGATAGACAAGCAGAGATGCTCCAG
AATTTAACCCCACCTCCATCCTATGCTGCTACAATTGCTTCTAAACTGGCAATTCACAATCCAAATTTACCCACCACCCT
GCCAGTTAACTCACAAAACATCCAACCTGTCAGATACAATAGAAGGAGTAACCCTGATTTGGAGAAACGACGCATTCACT
ACTGCGATTACCCTGGTTGCACAAAAGTTTATACAAAGTCTTCTCATTTAAAAGCTCACCTGAGGACTCACACTGGTGAA
AAGCCATACAAGTGCACCTGGGAAGGCTGCGACTGGAGGTTCGCGAGATCCGATGAGCTGACCCGCCACTACCGGAAGCA
CACGGGCGCCAAGCCCTTTCAGTGCGGGGTGTGCAACCGCAGCTTCTCACGCTCCGACCACCTGGCCCTGCACATGAAGA
GGCACCAGAACTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP051959_spleen | 3 .40 RPM |
| SRP051959_skeletal_muscle | 1 .79 RPM |
| SRP051959_lymph_node | 1 .39 RPM |
| SRP051959_lung | 19 .54 RPM |
| SRP051959_liver | 0 .65 RPM |
| SRP051959_kidney | 4 .53 RPM |
| SRP051959_heart | 3 .00 RPM |
| SRP051959_colon | 65 .05 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Choloepus hoffmanni | ENSCHOG00000009798 | ortholog_one2one | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000016120 | ortholog_one2many | 1 retrogene | |
| Pan troglodytes | ENSPTRG00000039565 | ortholog_one2many | 2 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_cjac_3188 | 93.88 | 71.12 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSCJAG00000021146 retrocopies