Parental gene: | ENSCJAG00000021322 |
| Aliases: | None |
| Description: | None |
| Organism: | Marmoset (Callithrix jacchus) |
| Coordinates: | 4:20395130..20614927(+) |
>ENSCJAG00000021322
ATGCCAGCGCGCCCAGGACGCCTCCTCCCGCCGCTGGCCCGGCCGTCGGCCCTGACCGCGCTGCTGCTGCTGCTGCTGGG
CCATGGCGGCGGCGGGCGTTGGAGAGCCCGGGCCCAGGACGGAGGGGACGGGCAAGACCCGCACAGCAAGCACCTGTACA
CGGCCGACATGTTCACGCACGGGATCCAGAGCGCCGCGCACTTCGTCATGTTCTTCGCGCCCTGGTATGGACACTGCCAG
CGGCTGCAGCCAACTTGGAATGACCTGGGAGACAAATACAACAGCATGGAAGATGCCAAAGTCTACGTGGCTAAAGTGGA
CTGCACGGCCGACTCTGACGTGTGCTCCGCCCAGGGGGTGCGAGGATACCCTACCTTAAAGTTTTTCAAGCCGGGCCAAG
AAGCTGTGAAGTACCAGGGTCCTCGGGACTTCCAGACTCTGGAAAACTGGATGCTACAGACGCTGAATGAGGAGCCAGTG
ACACCAGAGCCAAAAGTGGAACCACCCAGAGCCCCTGAGCTCAAGCAGGGGCTGTATGAGCTCTCAGCGAGCAACTTTGA
GCTGCACATTGCACAAGGCGACCACTTTATCAAGTTCTTCGCTCCATGGTGTGGTCACTGTAAAGCTCTGGCTCCAACCT
GGGAGCAGCTGGCTCTGGGCCTTGAACATTCCGAAACTGTCAAGATTGGCAAGGTTGATTGTACACAGCACTATGAACTC
TGCTCCGGAAACCAGGTTCGTGGCTATCCCACTCTTCTCTGGTTCCGAGATGGGGAAAAGGTCGATCAGTACAAGGGAAA
GCGGGATTTGGAGTCACTGAGGGAATACGTGGAGTCACAGCTGCAGCGCACAGAGACTGGAGCTGCGGAGACCGTCACAC
CCTCAGAGGCCCCGGTGCTGGCAGCCGAGCCTGAGGCTGACAAGGGCACTGTGTTGGCACTCACTGAAAAGAACTTCGAT
GACACCATTGCAGAAGGAATAACCTTCATCAAGTTTTATGCTCCATGGTGTGGTCATTGTAAGAATCTGGCTCCCACTTG
GGAGGAACTCTCTAAAAAGGAATTCCCTGGTCTGGCAGGGGTCAAGATAGCTGAAGTAGACTGCACCGCTGAACGGAATA
TTTGCAGCAAGTATTCGGTTCGAGGCTACCCTACATTGTTGCTTTTCCGAGGAGGGAAGAAAGTCAAAGCAGAACATACA
GAGCGTGCGGCCAACACACTCTACAGATTCTTAGTTTCTCCAAGTAAATGTGTAACT
ATGCCAGCGCGCCCAGGACGCCTCCTCCCGCCGCTGGCCCGGCCGTCGGCCCTGACCGCGCTGCTGCTGCTGCTGCTGGG
CCATGGCGGCGGCGGGCGTTGGAGAGCCCGGGCCCAGGACGGAGGGGACGGGCAAGACCCGCACAGCAAGCACCTGTACA
CGGCCGACATGTTCACGCACGGGATCCAGAGCGCCGCGCACTTCGTCATGTTCTTCGCGCCCTGGTATGGACACTGCCAG
CGGCTGCAGCCAACTTGGAATGACCTGGGAGACAAATACAACAGCATGGAAGATGCCAAAGTCTACGTGGCTAAAGTGGA
CTGCACGGCCGACTCTGACGTGTGCTCCGCCCAGGGGGTGCGAGGATACCCTACCTTAAAGTTTTTCAAGCCGGGCCAAG
AAGCTGTGAAGTACCAGGGTCCTCGGGACTTCCAGACTCTGGAAAACTGGATGCTACAGACGCTGAATGAGGAGCCAGTG
ACACCAGAGCCAAAAGTGGAACCACCCAGAGCCCCTGAGCTCAAGCAGGGGCTGTATGAGCTCTCAGCGAGCAACTTTGA
GCTGCACATTGCACAAGGCGACCACTTTATCAAGTTCTTCGCTCCATGGTGTGGTCACTGTAAAGCTCTGGCTCCAACCT
GGGAGCAGCTGGCTCTGGGCCTTGAACATTCCGAAACTGTCAAGATTGGCAAGGTTGATTGTACACAGCACTATGAACTC
TGCTCCGGAAACCAGGTTCGTGGCTATCCCACTCTTCTCTGGTTCCGAGATGGGGAAAAGGTCGATCAGTACAAGGGAAA
GCGGGATTTGGAGTCACTGAGGGAATACGTGGAGTCACAGCTGCAGCGCACAGAGACTGGAGCTGCGGAGACCGTCACAC
CCTCAGAGGCCCCGGTGCTGGCAGCCGAGCCTGAGGCTGACAAGGGCACTGTGTTGGCACTCACTGAAAAGAACTTCGAT
GACACCATTGCAGAAGGAATAACCTTCATCAAGTTTTATGCTCCATGGTGTGGTCATTGTAAGAATCTGGCTCCCACTTG
GGAGGAACTCTCTAAAAAGGAATTCCCTGGTCTGGCAGGGGTCAAGATAGCTGAAGTAGACTGCACCGCTGAACGGAATA
TTTGCAGCAAGTATTCGGTTCGAGGCTACCCTACATTGTTGCTTTTCCGAGGAGGGAAGAAAGTCAAAGCAGAACATACA
GAGCGTGCGGCCAACACACTCTACAGATTCTTAGTTTCTCCAAGTAAATGTGTAACT
| Library | Parental gene expression (RPM) |
|---|---|
| SRP051959_spleen | 58 .05 RPM |
| SRP051959_skeletal_muscle | 20 .72 RPM |
| SRP051959_lymph_node | 44 .95 RPM |
| SRP051959_lung | 34 .58 RPM |
| SRP051959_liver | 196 .20 RPM |
| SRP051959_kidney | 46 .06 RPM |
| SRP051959_heart | 33 .55 RPM |
| SRP051959_colon | 70 .80 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Choloepus hoffmanni | ENSCHOG00000002184 | ortholog_one2one | 4 retrogenes | |
| Microcebus murinus | ENSMICG00000005966 | ortholog_one2many | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_cjac_1041 | 88.51 | 76.37 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_cjac_4180 | 86.11 | 57.75 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSCJAG00000021322 retrocopies