Parental gene: | TSTA3, ENSCJAG00000021409 |
| Aliases: | None |
| Description: | tissue specific transplantation antigen P35B [Source:HGNC Symbol;Acc:12390] |
| Organism: | Marmoset (Callithrix jacchus) |
| Coordinates: | 16:51044414..51049202(+) |
>ENSCJAG00000021409
ATGGCAGAACCCCAGGGTTCCATGCGGATTCTAGTGACAGGGGGCTCTGGGCTGGTGGGCAAAGCCATCCAGAAGGTGGT
AGCAGATGGAGCTGGCCTTCCTGGAGAGGACTGGGTGTTTGTCTCCTCCAAGGACGCCGATCTCACGGATGCAGCACAGA
CCCGCACCCTGTTTGAGAAGGTCCGACCCACGCACGTCATCCATCTTGCTGCAATGGTGGGGGGCCTGTTCCGGAATATC
AAATACAATTTGGACTTCTGGAGGAAAAATGTGCACATCAATGACAATGTCCTGCACTCTGCCTTCGAGGTGGGCGCCCG
CAAGGTGGTATCCTGCCTGTCCACTTGTATCTTCCCTGACAAGACTACCTACCCCATAGATGAGACCATGATCCACAATG
GGCCGCCCCACAGCAGCAATTTTGGGTACTCCTATGCCAAGAGGATGATCGACGTGCAGAACAGGGCCTATTTCCAGCAG
CACGGCTGCACGTTCACCGCTGTCATCCCCACCAATGTCTTCGGGCCCCATGACAACTTCAACATCGAGGATGGCCATGT
GCTGCCTGGCCTCATCCACAAGGTGCACCTGGCCAAGAGCAGTGGCTCGGCCCTGACGGTGTGGGGTACAGGGAAGCCGC
GGAGGCAGTTCATATACTCACTGGACCTAGCCCAGCTTGTTATCTGGGTCCTGCGGGAGTACAATGAGGTGGAGCCCATC
ATCCTCTCAGTGGGCGAGGAAGATGAGGTCACCATCAGGGAGGCAGCCGAGGCCGTGGTGGAGGCCATGGACTTCCACGG
GGAGGTCACCTTTGATACAACCAAGTCGGATGGGCAGTTTAAGAAGACAGCCAGTAACAGCAAGCTGAGGACCTACCTGC
CCGATTTCCGGTTCACACCCTTCAAGCAGGCGGTGAAGGAGACCTGTGCATGGTTCACTGACAACTACGAGCAGGCCCGG
AAGTGA
ATGGCAGAACCCCAGGGTTCCATGCGGATTCTAGTGACAGGGGGCTCTGGGCTGGTGGGCAAAGCCATCCAGAAGGTGGT
AGCAGATGGAGCTGGCCTTCCTGGAGAGGACTGGGTGTTTGTCTCCTCCAAGGACGCCGATCTCACGGATGCAGCACAGA
CCCGCACCCTGTTTGAGAAGGTCCGACCCACGCACGTCATCCATCTTGCTGCAATGGTGGGGGGCCTGTTCCGGAATATC
AAATACAATTTGGACTTCTGGAGGAAAAATGTGCACATCAATGACAATGTCCTGCACTCTGCCTTCGAGGTGGGCGCCCG
CAAGGTGGTATCCTGCCTGTCCACTTGTATCTTCCCTGACAAGACTACCTACCCCATAGATGAGACCATGATCCACAATG
GGCCGCCCCACAGCAGCAATTTTGGGTACTCCTATGCCAAGAGGATGATCGACGTGCAGAACAGGGCCTATTTCCAGCAG
CACGGCTGCACGTTCACCGCTGTCATCCCCACCAATGTCTTCGGGCCCCATGACAACTTCAACATCGAGGATGGCCATGT
GCTGCCTGGCCTCATCCACAAGGTGCACCTGGCCAAGAGCAGTGGCTCGGCCCTGACGGTGTGGGGTACAGGGAAGCCGC
GGAGGCAGTTCATATACTCACTGGACCTAGCCCAGCTTGTTATCTGGGTCCTGCGGGAGTACAATGAGGTGGAGCCCATC
ATCCTCTCAGTGGGCGAGGAAGATGAGGTCACCATCAGGGAGGCAGCCGAGGCCGTGGTGGAGGCCATGGACTTCCACGG
GGAGGTCACCTTTGATACAACCAAGTCGGATGGGCAGTTTAAGAAGACAGCCAGTAACAGCAAGCTGAGGACCTACCTGC
CCGATTTCCGGTTCACACCCTTCAAGCAGGCGGTGAAGGAGACCTGTGCATGGTTCACTGACAACTACGAGCAGGCCCGG
AAGTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP051959_spleen | 5 .55 RPM |
| SRP051959_skeletal_muscle | 5 .55 RPM |
| SRP051959_lymph_node | 5 .57 RPM |
| SRP051959_lung | 5 .60 RPM |
| SRP051959_liver | 5 .05 RPM |
| SRP051959_kidney | 8 .92 RPM |
| SRP051959_heart | 4 .14 RPM |
| SRP051959_colon | 13 .56 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Sarcophilus harrisii | ENSSHAG00000006859 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_cjac_1785 | 87.04 | 100.00 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSCJAG00000021409 retrocopies