Parental gene: | ENSCJAG00000021566 |
| Aliases: | None |
| Description: | None |
| Organism: | Marmoset (Callithrix jacchus) |
| Coordinates: | 4:33809346..33822617(+) |
>ENSCJAG00000021566
ATGCTGCAGAACGTGACTCCTCACAACAAGCTCCCTGGGGAAGGGAATGCAGGGTTGCTGGGGCTGGGCCCAGAAGCAGC
AGCTCCAGGGAAAAGAATTCGAAAGCCTTCCCTCTTGTATGAGGGATTTGAGAGCCCCACAATGGCTTCGGTTCCTGCTT
TGCAACTGACCCCTGCCAACCCACCACCGCCGGAGGTGTCCAATCCCAAAAAGCCAGGACGAGTTACCAACCAGCTGCAA
TACCTACACAAGGTAGTGATGAAGGCTCTGTGGAAACATCAGTTTGCATGGCCATTCCGGCAGCCTGTGGATGCTGTCAA
GCTGGGTCTACCGGATTATCACAAAATTATAAAACAGCCTATGGACATGGGTACTATTAAGAGGAGACTTGAAAATAATT
ATTATTGGGCTGCCTCAGAGTGTATGCAAGATTTTAATACCATGTTCACCAACTGTTACATTTATAACAAGCCCACCGAT
GATATTGTCCTAATGGCACAAACATTGGAAAAGATCTTCCTACAGAAAGTTGCATCGATGCCACAAGAGGAACAAGAGTT
GGTGGTGACCATCCCTAAGAATAGCCACAAGAAGGGGGCCAAGTTGGCAGCACTCCAGGGCAGTGTTACCAGTGCCCATC
AGGTGCCTGCTGTCTCTTCTGTGTCACACACAGCCCTGTATACTCCACCACCTGAGATACCTACCACTGTCCTCAACATT
CCCCACCCATCAGTCATTTCCTCTCCACTTCTCAAGTCCCTGCACTCTGCTGGACCCCCACTCCTTGCTGTTACTGCAGC
TCCTCCAGCCCAGCCCCTTGCCAAGAAAAAAGGTGTAAAGCGGAAAGCAGATACTACCACTCCTACACCTACAGCCATCC
TGGCTCCTGGTTCCCCAGCTAGCCCTCCTGGGAGTCTTGAGCCTAAGGCAGCACGTCTTCCCCCTATGCGCAGAGAGAGT
GGTCGCCCCATCAAGCCCCCACGCAAAGACTTGCCTGATTCTCAGCAACAACACCAGAGCTCTAAGAAAGGAAAGCTTTC
AGAACAATTAAAACATTGCAATGGCATTTTGAAGGAGTTACTCTCTAAGAAGCATGCTGCTTATGCTTGGCCTTTCTATA
AACCAGTGGATGCTTCTGCACTTGGCCTGCATGACTACCATGACATCATTAAGCACCCCATGGACCTCAGCACTGTCAAG
CGGAAGATGGAGAACCGTGATTACCGGGATGCACAGGAGTTTGCTGCTGACGTACGGCTCATGTTCTCTAACTGCTATAA
GTACAATCCCCCAGATCACGATGTTGTGGCAATGGCACGAAAGCTACAGGATGTATTTGAGTTCCGTTATGCCAAGATGC
CAGATGAACCACTGGAACCAGGGCCTTTACCAGTCTCTACTGCCATTCCCCCTGGCTTGGCCAAATCATCTTCAGAGTCC
TCCAGTGAGGAAAGTAGCAGTGAGAGCTCCTCTGAGGAAGAGGAGGAGGAAGATGAGGAGGATGAGGAAGAAGAGAGTGA
AAGCTCAGACTCAGAGGAAGAAAGGGCTCATCGCTTGGCAGAACTGCAGGAACAGCTTCGGGCAGTACATGAACAACTGG
CTGCTCTGTCCCAGGGTCCTATATCCAAGCCTAAGAGGAAAAGAGAGAAAAAAGAGAAAAAGAAGAAACGGAAGGCAGAG
AAGCATCGAGGACGAGCTGGGGCCGATGAAGATGACAAGGGGCCTCGAGCACCCCGCCCACCTCAGCCCAAGAAGTCCAA
GAAAGCAAGTGTCAGTGGCGGTGGCAGTGCTGCTTTAGGCCCTTCGGGCTTTGGACCTTCTGGAGGAAGTGGCACCAAGC
TCCAGGCTAGAGTGTGGCGCAATCTCGGCTCACTGCAACCTCCGTTTATTGGGTTCAAGCCATTCTCCTGCCTCAGCCTC
CTGAGTAGCCAAGATTACAGGCTCCCGAAAAAGGCCACAAAGACAGCCCCACCTGCCCTGCCTACGGGTTATGATTCAGA
GGAAGAAGAAGAGAGCAGGCCCATGAGTTACGATGAAAAGCGGCAGCTGAGCCTGGACATCAACAAATTACCTGGAGAGA
AGCTGGGCCGAGTTGTGCACATAATCCAAGCCAGGGAACCCTCTTTACGTGATTCAAACCCAGAAGAGATTGAAATTGAT
TTTGAAACACTCAAGCCATCCACACTTAGAGAGCTTGAGCGCTACGTCCTTTCCTGCCTACGTAAGAAACCCCGGAAGCC
CTACACCATCAAGAAGCCTGTGGGAAAGACAAAGGAAGAACTGGCTTTGGAAAAAAAGCGGGAATTAGAAAAGCGGTTAC
AAGATGTCAGTGGACAGCTCAATTCCACTAAAAAGCCCCCCAAGAAAGCAAGTGAGAAAACAGAGTCATCCTCTGCACAG
CAAGTAGTAGTGTCACGCCTCAGCGCTTCCAGCTCCAGCTCGGATTCCAGCTCCTCCTCTTCATCGTCGTCGTCTTCAGA
CACCAGTGATTCAGACTCAGGCTAA
ATGCTGCAGAACGTGACTCCTCACAACAAGCTCCCTGGGGAAGGGAATGCAGGGTTGCTGGGGCTGGGCCCAGAAGCAGC
AGCTCCAGGGAAAAGAATTCGAAAGCCTTCCCTCTTGTATGAGGGATTTGAGAGCCCCACAATGGCTTCGGTTCCTGCTT
TGCAACTGACCCCTGCCAACCCACCACCGCCGGAGGTGTCCAATCCCAAAAAGCCAGGACGAGTTACCAACCAGCTGCAA
TACCTACACAAGGTAGTGATGAAGGCTCTGTGGAAACATCAGTTTGCATGGCCATTCCGGCAGCCTGTGGATGCTGTCAA
GCTGGGTCTACCGGATTATCACAAAATTATAAAACAGCCTATGGACATGGGTACTATTAAGAGGAGACTTGAAAATAATT
ATTATTGGGCTGCCTCAGAGTGTATGCAAGATTTTAATACCATGTTCACCAACTGTTACATTTATAACAAGCCCACCGAT
GATATTGTCCTAATGGCACAAACATTGGAAAAGATCTTCCTACAGAAAGTTGCATCGATGCCACAAGAGGAACAAGAGTT
GGTGGTGACCATCCCTAAGAATAGCCACAAGAAGGGGGCCAAGTTGGCAGCACTCCAGGGCAGTGTTACCAGTGCCCATC
AGGTGCCTGCTGTCTCTTCTGTGTCACACACAGCCCTGTATACTCCACCACCTGAGATACCTACCACTGTCCTCAACATT
CCCCACCCATCAGTCATTTCCTCTCCACTTCTCAAGTCCCTGCACTCTGCTGGACCCCCACTCCTTGCTGTTACTGCAGC
TCCTCCAGCCCAGCCCCTTGCCAAGAAAAAAGGTGTAAAGCGGAAAGCAGATACTACCACTCCTACACCTACAGCCATCC
TGGCTCCTGGTTCCCCAGCTAGCCCTCCTGGGAGTCTTGAGCCTAAGGCAGCACGTCTTCCCCCTATGCGCAGAGAGAGT
GGTCGCCCCATCAAGCCCCCACGCAAAGACTTGCCTGATTCTCAGCAACAACACCAGAGCTCTAAGAAAGGAAAGCTTTC
AGAACAATTAAAACATTGCAATGGCATTTTGAAGGAGTTACTCTCTAAGAAGCATGCTGCTTATGCTTGGCCTTTCTATA
AACCAGTGGATGCTTCTGCACTTGGCCTGCATGACTACCATGACATCATTAAGCACCCCATGGACCTCAGCACTGTCAAG
CGGAAGATGGAGAACCGTGATTACCGGGATGCACAGGAGTTTGCTGCTGACGTACGGCTCATGTTCTCTAACTGCTATAA
GTACAATCCCCCAGATCACGATGTTGTGGCAATGGCACGAAAGCTACAGGATGTATTTGAGTTCCGTTATGCCAAGATGC
CAGATGAACCACTGGAACCAGGGCCTTTACCAGTCTCTACTGCCATTCCCCCTGGCTTGGCCAAATCATCTTCAGAGTCC
TCCAGTGAGGAAAGTAGCAGTGAGAGCTCCTCTGAGGAAGAGGAGGAGGAAGATGAGGAGGATGAGGAAGAAGAGAGTGA
AAGCTCAGACTCAGAGGAAGAAAGGGCTCATCGCTTGGCAGAACTGCAGGAACAGCTTCGGGCAGTACATGAACAACTGG
CTGCTCTGTCCCAGGGTCCTATATCCAAGCCTAAGAGGAAAAGAGAGAAAAAAGAGAAAAAGAAGAAACGGAAGGCAGAG
AAGCATCGAGGACGAGCTGGGGCCGATGAAGATGACAAGGGGCCTCGAGCACCCCGCCCACCTCAGCCCAAGAAGTCCAA
GAAAGCAAGTGTCAGTGGCGGTGGCAGTGCTGCTTTAGGCCCTTCGGGCTTTGGACCTTCTGGAGGAAGTGGCACCAAGC
TCCAGGCTAGAGTGTGGCGCAATCTCGGCTCACTGCAACCTCCGTTTATTGGGTTCAAGCCATTCTCCTGCCTCAGCCTC
CTGAGTAGCCAAGATTACAGGCTCCCGAAAAAGGCCACAAAGACAGCCCCACCTGCCCTGCCTACGGGTTATGATTCAGA
GGAAGAAGAAGAGAGCAGGCCCATGAGTTACGATGAAAAGCGGCAGCTGAGCCTGGACATCAACAAATTACCTGGAGAGA
AGCTGGGCCGAGTTGTGCACATAATCCAAGCCAGGGAACCCTCTTTACGTGATTCAAACCCAGAAGAGATTGAAATTGAT
TTTGAAACACTCAAGCCATCCACACTTAGAGAGCTTGAGCGCTACGTCCTTTCCTGCCTACGTAAGAAACCCCGGAAGCC
CTACACCATCAAGAAGCCTGTGGGAAAGACAAAGGAAGAACTGGCTTTGGAAAAAAAGCGGGAATTAGAAAAGCGGTTAC
AAGATGTCAGTGGACAGCTCAATTCCACTAAAAAGCCCCCCAAGAAAGCAAGTGAGAAAACAGAGTCATCCTCTGCACAG
CAAGTAGTAGTGTCACGCCTCAGCGCTTCCAGCTCCAGCTCGGATTCCAGCTCCTCCTCTTCATCGTCGTCGTCTTCAGA
CACCAGTGATTCAGACTCAGGCTAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP051959_spleen | 74 .96 RPM |
| SRP051959_skeletal_muscle | 37 .74 RPM |
| SRP051959_lymph_node | 77 .87 RPM |
| SRP051959_lung | 81 .14 RPM |
| SRP051959_liver | 46 .18 RPM |
| SRP051959_kidney | 73 .99 RPM |
| SRP051959_heart | 53 .22 RPM |
| SRP051959_colon | 53 .38 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Oryctolagus cuniculus | ENSOCUG00000003097 | ortholog_one2many | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_cjac_564 | 87.31 | 65.50 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_cjac_2409 | 80.84 | 59.12 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSCJAG00000021566 retrocopies